Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq58440 84.2 3e-11 >seq58440 Length=15377 Score = 84.2 bits (92), Expect = 3e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899 |||||||| |||||||||||||| | | || | || | | ||||| ||||| || Sbjct 6368 TTGTCCACTGTGAACTGAATGGCACTAGCCGCTGCTTTGGTACGAAGATAATACATCCCT 6309 Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 || || | || | ||| ||||| | |||||||| | ||||| | ||| || Sbjct 6308 GTTTTCAATCCGAGTTTCCAACCGTAGAAATGCATGGATGTAAGTTTTCCGTAGTTAGGC 6249 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019 | || || || ||||||| || || ||||| || || |||| | | ||||| || ||| Sbjct 6248 TGTGCGATATGTATGTTCAAGGATTGACTTTGATCAATAAAAGCCCCGCGATCAGCAGCC 6189 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 || | | | ||||| || ||||| ||||| || || || Sbjct 6188 ATTTGAAGGACCGTCTTTTGAGAAATTTCCCAGACTGTTTT 6148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794328586472400