Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq20317 105 8e-18 >seq20317 Length=5186 Score = 105 bits (116), Expect = 8e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| || ||||||||||| | || || | || || | ||||| || || || Sbjct 709 TCCTTTTGAATGTTGTAGTCGGACAATGTACGTCCATCCTCCAATTGCTTTCCAGCAAAG 768 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| || ||||| || | || | | ||||| ||| |||||| |||||| | Sbjct 769 ATCAAACGTTGCTGATCTGGGGGGATTCCTTCCTTATCCTGGATCTTGGTCTTGACATTT 828 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| | |||||| || | ||||||||||| ||||| || ||||| ||| Sbjct 829 TCAATCGTGTCTGAAGCTTCCACTTCAAGTGTGATGGTTTTACCCGTGAGAGTTTTCACA 888 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 889 AAGATTTGCAT 899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564650799355800