Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq47256 134 2e-26 >seq47256 Length=30279 Score = 134 bits (148), Expect = 2e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 47956 GTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCA 48015 |||||||| ||||||| | ||| ||| ||||||||| || | ||||||| |||| ||| Sbjct 24625 GTTACAAAGTTTTCACCTCTTCTCGGACTTTCATGATTGAATAAAATACCATTACAAGCA 24684 Query 48016 TACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACA 48075 |||| || || | || || | || | ||| ||| || ||||||||||||| ||| Sbjct 24685 AACATACCATAGGCCTCCCGGAAATTAATAACTGACCAATATGCATAGAGTTTTGCTACA 24744 Query 48076 CCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTA 48135 ||||||||| | ||||| || || || || || | || ||| |||||||| ||| Sbjct 24745 CCATAAGGACTTCTAGGATAAAATGGGGTAGTTTCCTTTTGCGGAACTTCTTGCACTTTA 24804 Query 48136 CCATAAAGTTCACTGGTGGATGCTTGATA 48164 |||||||| || |||||| |||||||| Sbjct 24805 CCATAAAGCTCCGAGGTGGAGGCTTGATA 24833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664802576977800