Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq79757 82.4 9e-11 seq44052 82.4 9e-11 >seq79757 Length=35421 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 18126 CATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAA 18185 ||||| | ||||||||| || ||||| ||| ||||||| ||||||||||||||||| | Sbjct 18856 CATTCTCCGGTAGCTCAGTGGTAGAGCACTCGGCTGTTAACCGATTGGTCGTAGGTTCGA 18915 Query 18186 ATCCTACCTGGGGAG 18200 |||||||| || ||| Sbjct 18916 ATCCTACCCGGAGAG 18930 >seq44052 Length=17496 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 18126 CATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAA 18185 ||||| | ||||||||| || ||||| ||| ||||||| ||||||||||||||||| | Sbjct 1449 CATTCTCCGGTAGCTCAGTGGTAGAGCACTCGGCTGTTAACCGATTGGTCGTAGGTTCGA 1508 Query 18186 ATCCTACCTGGGGAG 18200 |||||||| || ||| Sbjct 1509 ATCCTACCCGGAGAG 1523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560664547626000