Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_021794.1 Length=71443 Score E Sequences producing significant alignments: (Bits) Value seq45086 109 3e-19 >seq45086 Length=40113 Score = 109 bits (120), Expect = 3e-19 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 20766 GGAAAATCCTCAAAATCTGTTATCATTATTTCTTCTCTTGGACTGTCTAACGGACTTTTT 20825 ||||| | |||||||| || | ||| | ||||||||||||| ||||| || |||| Sbjct 36590 GGAAACCCTTCAAAATCGGTAAACATAACTTCTTCTCTTGGAAAATCTAAAGGTGATTTT 36531 Query 20826 TCGTCGCACTCTTGGAAGTGGTTTAAAATATACTCGTTCAATTCTTCTGCATCGCTAAAT 20885 | ||| |||| || || || || |||| ||||||| ||||| || || Sbjct 36530 TTGTCTGCTTCTTCAAAATGTTTGTTTATGTACTTAAAAAATTCTTTTGCATTTTTATAT 36471 Query 20886 TGGTCTAACTCTACCCAGTGCCCAAACTCGAATTGTGTCCCATTGTTATAGCTTGCATAA 20945 | ||| || ||||| || ||||| |||||||| || ||||| ||||||||||| || Sbjct 36470 TTTCTTAAATCAACCCAATGTCCAAATTCGAATTGAGTTCCATTATTATAGCTTGCGTAG 36411 Query 20946 TCAGTTAAAAATA--TTCTTCCCTTTGTT 20972 ||||||||||| | ||| | | |||||| Sbjct 36410 TCAGTTAAAAAGAGTTTCATACTTTTGTT 36382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 228261205767260