Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_021798.1 Length=145343 Score E Sequences producing significant alignments: (Bits) Value seq79757 91.5 1e-13 seq44052 91.5 1e-13 >seq79757 Length=35421 Score = 91.5 bits (100), Expect = 1e-13 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 87809 CCATCGTCTAACGGCTAGGACCTCAGGTTTTCATCCTGGTAATCGGAGTTCGATTCTCCG 87868 |||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||| ||| Sbjct 17724 CCATCGTCTAACGGTTAGGACATCAGGTTTTCATCCTGGAAATCGGGGTTCGATTCCCCG 17665 Query 87869 TGG 87871 ||| Sbjct 17664 TGG 17662 >seq44052 Length=17496 Score = 91.5 bits (100), Expect = 1e-13 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 87809 CCATCGTCTAACGGCTAGGACCTCAGGTTTTCATCCTGGTAATCGGAGTTCGATTCTCCG 87868 |||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||| ||| Sbjct 317 CCATCGTCTAACGGTTAGGACATCAGGTTTTCATCCTGGAAATCGGGGTTCGATTCCCCG 258 Query 87869 TGG 87871 ||| Sbjct 257 TGG 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464486235040200