Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_021803.1 Length=72369 Score E Sequences producing significant alignments: (Bits) Value seq45086 107 9e-19 >seq45086 Length=40113 Score = 107 bits (118), Expect = 9e-19 Identities = 153/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 20582 TTTGGGAAATCCT-CAAAATCTGTTATCATTGTTTCTTCTCTTGGACTGTCTAACGGACT 20640 || |||||| ||| ||||||| || | ||| ||||||||||||| ||||| || Sbjct 36594 TTCGGGAAACCCTTCAAAATCGGTAAACATAACTTCTTCTCTTGGAAAATCTAAAGGTGA 36535 Query 20641 TTTTTCGTCGCACTCTTGGAAGTGGTTTAAAATATACTCGTTCAATTCTTCTGCATCGCT 20700 ||||| ||| |||| || || || || |||| ||||||| ||||| | Sbjct 36534 TTTTTTGTCTGCTTCTTCAAAATGTTTGTTTATGTACTTAAAAAATTCTTTTGCATTTTT 36475 Query 20701 AAATTGGTCTAACTCTACCCAGTGCCCAAACTCGAATTGTGTCCCATTGTTATAGCTTGC 20760 | ||| ||| || ||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct 36474 ATATTTTCTTAAATCAACCCAATGTCCAAATTCGAATTGAGTTCCATTATTATAGCTTGC 36415 Query 20761 ATAATCAGTTAAAAATA--TTCTTCCCTTTGTT 20791 || ||||||||||| | ||| | | |||||| Sbjct 36414 GTAGTCAGTTAAAAAGAGTTTCATACTTTTGTT 36382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231221402346450