Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq66674 172 6e-38 seq42503 165 9e-36 seq20317 163 3e-35 seq17180 145 9e-30 seq62093 143 3e-29 seq12343 123 3e-23 seq65606 98.7 1e-15 seq65604 98.7 1e-15 seq34433 84.2 2e-11 >seq66674 Length=28361 Score = 172 bits (190), Expect = 6e-38 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||||||||| || ||||| || || || || |||||||| || || | Sbjct 27876 AATGCAAATCTTTGTCAAAACCCTTACTGGTAAAACAATCACTCTTGAAGTCGAAGCTTC 27817 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| |||| | || ||||||||||| |||||||| || ||||| ||||| || Sbjct 27816 TGATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGATCA 27757 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||| |||| ||||||||||| ||| | || |||| | || || |||| ||||| Sbjct 27756 ACAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACGCTTTCAGATTATAA 27697 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | ||||||||||| ||||||||| |||| || Sbjct 27696 CATTCAAAAGGAATCTACTCTTCATTTAGTTTT 27664 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || || || || || || |||||||| |||||| | | Sbjct 27419 ATGCAGATTTTCGTTAAAACACTCACTGGTAAAACAATCACTCTTGAAGTTGAGCCCTCT 27360 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | || || |||||||| ||||||||||| ||||||||||| ||| Sbjct 27359 GATACCATTGAGAATGTTAAAGCCAAAATTCAAGACAAGGAGGGCATTCCTCCAGATCAG 27300 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || ||||||||||| ||| | || |||| || || || | || ||||| Sbjct 27299 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGCACTTTATCCGATTATAAC 27240 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | ||||| ||||| || ||||| | || ||||| ||||| |||||| Sbjct 27239 ATTCAAAAAGAATCTACCCTTCACTTGGTTTTGCGCCTTCGTGGTGGA 27192 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || || || || || || || || |||||||| ||||| | Sbjct 27648 AATGCAGATTTTCGTTAAAACACTCACTGGTAAAACAATCACTCTTGAAGTTGAAGCTTC 27589 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | |||| | |||||||||||||| ||||| || || ||||||||||| || Sbjct 27588 TGATACTATAGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCA 27529 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||| | || ||||||||||| ||| | ||||||| ||||| || |||||||||| Sbjct 27528 GCAACGTTTGATCTTTGCTGGTAAACAATTAGAGGATGGACGTACTTTATCAGACTATAA 27469 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || ||||| | ||| |||| || | ||| | ||||| Sbjct 27468 CATTCAAAAAGAGTCCACGTTGCATTTAGTTTTAAGACTTAGAGGTGG 27421 Score = 156 bits (172), Expect = 5e-33 Identities = 163/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| | ||||| || || || |||||||| || || | Sbjct 28104 AATGCAAATCTTTGTTAAGACCTTAACCGGTAAAACAATCACTCTTGAAGTCGAAGCTTC 28045 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| | || || || || || || ||||| || ||||| ||||| || Sbjct 28044 AGACACAATTGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCA 27985 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||| |||| ||||||||||| ||| | || |||| | ||||| |||| ||||| Sbjct 27984 ACAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCCTTTCAGATTATAA 27925 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | | ||||||||||||||||||||| |||| ||| Sbjct 27924 TATTCAAAAGGAATCCACTCTTCATTTAGTATTG 27891 Score = 141 bits (156), Expect = 1e-28 Identities = 158/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| || || || || || || || || || ||||| || || | Sbjct 28332 AATGCAGATTTTTGTTAAAACTCTGACTGGAAAAACCATCACACTTGAAGTGGAAGCTTC 28273 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| | |||||||||||||| || ||||| || ||||| |||||||| Sbjct 28272 AGACACAATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGACCA 28213 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||| | || ||||||||||| ||| | ||||||| | || || |||| ||||| Sbjct 28212 ACAACGTTTGATCTTTGCTGGTAAACAATTAGAGGATGGAAGAACACTTTCAGATTATAA 28153 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 |||||||||| ||||| ||||| || ||| Sbjct 28152 CATCCAAAAGGAGTCCACCCTTCACCTGGTC 28122 >seq42503 Length=950 Score = 165 bits (182), Expect = 9e-36 Identities = 163/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||||||||| | || || || ||||| |||||||| || || | Sbjct 411 AATGCAAATTTTTGTCAAGACCTTAACTGGTAAAACTATCACTCTTGAAGTCGAAGCTTC 352 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| ||| | |||||||||||||| || ||||| || ||||| |||||||| Sbjct 351 TGATACTATTGAGAATGTTAAGGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGACCA 292 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||| | || ||||||||||| ||| | ||||||| | || || |||| ||||| Sbjct 291 ACAACGTTTGATCTTTGCTGGTAAACAATTAGAGGATGGAAGAACACTTTCAGATTATAA 232 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 |||||||||| ||||| ||||| ||||| Sbjct 231 CATCCAAAAGGAGTCCACCCTTCACTTAGTC 201 Score = 152 bits (168), Expect = 6e-32 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| | ||||| || || || |||||||| || || | Sbjct 867 AATGCAAATCTTTGTTAAGACCTTAACCGGTAAAACAATCACTCTTGAAGTCGAAGCTTC 808 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| | || || || || || || ||||| || ||||| ||||| || Sbjct 807 AGACACAATTGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCA 748 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||| |||| ||||||||||| ||| | || |||| | || || |||| ||||| Sbjct 747 ACAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACNCTTTCAGATTATAA 688 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | | ||||||||||||||||||||| |||| ||| Sbjct 687 TATTCAAAAGGAATCCACTCTTCATTTAGTATTG 654 Score = 145 bits (160), Expect = 9e-30 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| | || || || ||||| |||||||| || || | | Sbjct 182 ATGCARATTTTTGTCAAGACCTTAACTGGTAAAACTATCACTCTTGAAGTCGAAGCTTCT 123 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||||||||||| || || ||||| |||||||||||||| ||| Sbjct 122 GATACTATTGAGAATGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCTCCAGATCAG 63 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | |||||||||||||| ||| | || |||| ||||| || |||||||||| Sbjct 62 CAGAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTTTATCAGACTATAA 4 Score = 125 bits (138), Expect = 8e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || || || || || || || || || ||||| ||||| | Sbjct 639 AATGCAGATTTTCGTTAAAACCCTCACTGGAAAAACCATCACACTTGAAGTTGAAGCCTC 580 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| |||| | |||||||||||||| || ||||| |||||||||||||| || Sbjct 579 AGACACCATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAAGGAATTCCTCCAGATCA 520 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | || |||||||| |||||| | || |||| | || || | || || || Sbjct 519 GCAAAGATTGATATTTGCTGGCAAGCAATTAGAAGATGGAAGAACTCTTTCCGATTACAA 460 Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608 | |||| ||||| || || ||||| Sbjct 459 TATCCAGAAGGAGTCAACCCTTCA 436 >seq20317 Length=5186 Score = 163 bits (180), Expect = 3e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||||||||| || | || || ||||| ||||| || |||||||| | Sbjct 672 AATGCAGATCTTTGTCAAAACTTTGACTGGAAAGACCATTACGCTCGAGGTTGAACCCTC 613 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||||| ||| | ||||| || ||||| || ||||| |||||||| ||||| || Sbjct 612 AGATACCATTGAAAACGTTAAGGCCAAGATTCAAGATAAGGAAGGAATTCCCCCAGATCA 553 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || |||||||| ||||| | || |||| ||||| | ||||||| || Sbjct 552 GCAGAGACTGATCTTTGCTGGAAAGCAGTTGGAAGATGGACGTACTTTGTCAGACTACAA 493 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 |||||||||||||||| |||||| |||| || Sbjct 492 CATCCAAAAGGAATCCACCCTTCATTTAGTATT 460 Score = 152 bits (168), Expect = 6e-32 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| | ||||| || || || |||||||| || || | Sbjct 216 AATGCAAATCTTTGTTAAGACCTTAACCGGTAAAACAATCACTCTTGAAGTCGAAGCTTC 157 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| | || || || || || || ||||| || ||||| ||||| || Sbjct 156 AGACACAATTGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCA 97 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||| |||| ||||||||||| ||| | || |||| | || || |||| ||||| Sbjct 96 ACAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACTCTTTCAGATTATAA 37 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | | ||||||||||||||||||||| |||| ||| Sbjct 36 TATTCAAAAGGAATCCACTCTTCATTTAGTATTG 3 Score = 149 bits (164), Expect = 7e-31 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| || || || || || || || || |||||||| || || | Sbjct 444 AATGCAGATTTTTGTTAAAACTCTCACTGGAAAAACAATCACTCTTGAAGTGGAAGCTTC 385 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| | ||||||||||| || || ||||| |||||||||||||| || Sbjct 384 AGACACTATTGAAAATGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCTCCAGATCA 325 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | | ||||||||||| || ||| | || |||| ||||| || |||||||||| Sbjct 324 GCAGAGATTGATTTTTGCTGGYAAACAATTAGAAGATGGACGTACTTTATCAGACTATAA 265 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 | |||||||| || || |||||| | ||| Sbjct 264 CATTCAAAAGGAGTCGACCCTTCATTTGGTC 234 Score = 136 bits (150), Expect = 5e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || || || || || || || || ||||| || || | Sbjct 899 ATGCAAATCTTTGTGAAAACTCTCACGGGTAAAACCATCACACTTGAAGTGGAAGCTTCA 840 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||| | || || ||||| ||||| ||||| || ||||| ||| Sbjct 839 GACACGATTGAAAATGTCAAGACCAAGATCCAGGATAAGGAAGGAATCCCCCCAGATCAG 780 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || |||||||| |||||| | ||||||| ||||| | | ||||| || Sbjct 779 CAACGTTTGATCTTTGCTGGAAAGCAATTGGAGGATGGACGTACATTGTCCGACTACAAC 720 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | ||||||||||||||||| || ||||| || Sbjct 719 ATTCAAAAGGAATCCACTCTCCACTTAGTCCTG 687 >seq17180 Length=12851 Score = 145 bits (160), Expect = 9e-30 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || || || || |||||||| |||||||||||| | Sbjct 3932 ATGCAGATTTTCGTGAAGACCCTCACGGGTAAAACTATTACCCTTGAGGTTGAGGCCTCA 3991 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | ||| | ||||| ||||| |||||||||||||||||||| ||| Sbjct 3992 GATACTATCGAAAATGTTAAGACCAAAATCCAGGATAAGGAGGGAATTCCTCCAGATCAG 4051 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || ||||| || |||||| | ||||||| |||||||| | ||||| || Sbjct 4052 CAACGTTTGATCTTTGCGGGAAAGCAATTAGAGGATGGCCGTACCCTTTCGGACTACAAC 4111 Query 27586 GTCCAAAA 27593 | ||||| Sbjct 4112 ATTCAAAA 4119 >seq62093 Length=56387 Score = 143 bits (158), Expect = 3e-29 Identities = 126/157 (80%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||| || | || |||||||| ||||| |||||||| || | Sbjct 3717 ATGCAAATCTTCGTCAAAACTTTGACGGGCAAGACCATTACCCTTGAGGTCGAACCTTCA 3658 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | |||| ||||| |||| || ||||| ||||| |||||||||||||| ||| Sbjct 3657 GATACCATCGAAAATGTGAAGACTAAGATCCAGGATAAGGAAGGAATTCCTCCAGATCAG 3598 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 || ||||| || |||||||| ||||| ||||| |||| Sbjct 3597 CAACGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATG 3561 >seq12343 Length=6788 Score = 123 bits (136), Expect = 3e-23 Identities = 165/230 (72%), Gaps = 11/230 (5%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| ||| | || || |||||||| |||||||||||| | Sbjct 2377 ATGCAGATTTTCGTAAAGACCCTTGCGGGTAAAACTATTACCCTTGAGGTTGAGGCCT-- 2320 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCC---AGAC 27522 || | |||| | || | ||||| |||| ||||||||||| ||||| ||| Sbjct 2319 ------ATCGAAAATGTTAAAACAAAAATCAAGGATAAGGAGGGAATACCTCCTCTAGAT 2266 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| ||| | || |||| ||| || ||| | ||||||| |||||| || ||||| Sbjct 2265 CAGCAACGTTTGATCTTTGTTGGAAAACAATTAGAGGATGGTCGTACTCTTTTGGACTAC 2206 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | |||| ||||||||||||||| | || | |||| || ||||| Sbjct 2205 AACATTAAAAAAGAATCCACTCTTCATTTGGTTCTCTGTCTCCGAGGTGG 2156 >seq65606 Length=3149 Score = 98.7 bits (108), Expect = 1e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||| ||||||||||||| || | || |||||||| || | ||||||| || | Sbjct 2504 ATGGAAATCTTTGTCAAAACTTTGACGGGCAAGACCATCTCCCTTGAGGCCGAACCTTCA 2445 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | |||| |||| |||| | || || ||||| |||||||||||||| ||| Sbjct 2444 GATACCATCGAAAATGTGAAAACTAAGCTCCAAGATAAGGAAGGAATTCCTCCAGATCAG 2385 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 || ||| || |||||||| |||| || || |||| Sbjct 2384 CAATGTCGCATCTTTGCTGGCCAGCAGCTTGAAGATG 2348 >seq65604 Length=3149 Score = 98.7 bits (108), Expect = 1e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||| ||||||||||||| || | || |||||||| || | ||||||| || | Sbjct 646 ATGGAAATCTTTGTCAAAACTTTGACGGGCAAGACCATCTCCCTTGAGGCCGAACCTTCA 705 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | |||| |||| |||| | || || ||||| |||||||||||||| ||| Sbjct 706 GATACCATCGAAAATGTGAAAACTAAGCTCCAAGATAAGGAAGGAATTCCTCCAGATCAG 765 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 || ||| || |||||||| |||| || || |||| Sbjct 766 CAATGTCGCATCTTTGCTGGCCAGCAGCTTGAAGATG 802 >seq34433 Length=49335 Score = 84.2 bits (92), Expect = 2e-11 Identities = 168/243 (69%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 27393 AAATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGA 27452 ||||||| | ||| | || ||||| || || || || || || | ||| || |||| Sbjct 45312 AAATATTTCAGATATGTAGATTTTTGTGAAAACTCTCACTGGTAAAAATATAACCTTTGA 45371 Query 27453 GGTTGAG---TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||||| |||| | || | | ||| | ||| | ||||| ||||| ||||||| Sbjct 45372 GGTTGATGGCTCAGATTCTA---TGGAGAATGTTAAGACCAAAATCCAGGATAAGGAGG- 45427 Query 27510 AATTCCT-CCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568 || ||| ||||| ||||| ||| | || ||||| | | | | | || ||||| | || Sbjct 45428 -ATCCCTTCCAGATCAGCAACGTTTGATCTTTGCCAGAATGAAGTTAGAAGATGACCTTA 45486 Query 27569 CCCTAGCAGA-CTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 | || | ||| ||| || | |||| |||||||||||||| | || | |||||||| Sbjct 45487 CTCT-GTAGAACTAAAACATTAAAAAAGAATCCACTCTTCACTTGGTTCTCCGTCTTCGA 45545 Query 27628 GGT 27630 ||| Sbjct 45546 GGT 45548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569717526694800