Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq46208 105 6e-18 >seq46208 Length=8390 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 118474 TCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTA 118533 ||||||||||| | || || || ||||| || | ||||| ||||||||||||||| | Sbjct 5533 TCAATGTGATTGTTGTATACGTGTGCATCACCTAAGGTATGAATGAATTCACCAGGTTTG 5592 Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || |||| || || | ||| || || | | || || |||| |||||||| Sbjct 5593 AGATTGGTCACATGGGCCAACATAATCGTTAAGAGAGAATAACTTGCTATGTTAAAAGGT 5652 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 || || | ||||| ||||| |||| || || ||||| ||||| || || || || ||| Sbjct 5653 ACTCCTAATCCCATATCTGCAGATCGTTGATATAATTGACAAGATAGTTCACCATTGGCA 5712 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 |||||||| ||| | |||||| || || ||| |||| Sbjct 5713 ACATAAAATTGAGCCAAACAGTGACAAGGGGGAAGAGCCAT 5753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414056697325060