Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq17180 82.4 7e-11 >seq17180 Length=12851 Score = 82.4 bits (90), Expect = 7e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 || |||||||| ||||| || ||||| || | || || | ||||| || || || ||| Sbjct 4119 TTTTGAATGTTGTAGTCCGAAAGGGTACGGCCATCCTCTAATTGCTTTCCCGCAAAGATC 4060 Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794 | || || || || | |||| | |||||| ||| |||||| ||| ||| | Sbjct 4059 AAACGTTGCTGATCTGGAGGAATTCCCTCCTTATCCTGGATTTTGGTCTT-AACATTTTC 4001 Query 41795 -ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 | ||| || | ||| ||||| | || || ||||||||||| || ||||| ||||| Sbjct 4000 GATAGTATCTGAGGCCTCAACCTCAAGGGTAATAGTTTTACCCGTGAGGGTCTTCACGAA 3941 Query 41854 AATCTGCAT 41862 ||||||||| Sbjct 3940 AATCTGCAT 3932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461823406098000