Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq643 185 6e-42 >seq643 Length=490110 Score = 185 bits (204), Expect = 6e-42 Identities = 355/517 (69%), Gaps = 6/517 (1%) Strand=Plus/Minus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||| || || || |||||| | |||| | || || |||||||| ||||||||||| | Sbjct 177002 CAGTAACGTGTGCTATCATATATGTTAGCAAAGCGTAACTAGCAATATTAAAAGGCACTC 176943 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 | ||||||||||| || |||| |||||| | ||||| ||||| | ||| | ||| Sbjct 176942 CAAGTCCCATATCTGCAGATCGTTGATAAAGTTGACATGAAAGTTCATCATTTCCTACAA 176883 Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCC 97294 ||||||| ||| ||| || || || || ||||||| ||| | ||| | |||| Sbjct 176882 AAAACTGGACCAAACAATGGCAAGGAGGTAATGCCATTTCTGGGATATCAATAGGGTTCC 176823 Query 97295 AAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCT 97354 | |||||||| | || | |||||| | || |||| | ||| ||||| |||| || Sbjct 176822 ATGCACACATTATGATGCGTCTATCATTAGGTCTTGTTTTTATAGTATTTATTACATGAG 176763 Query 97355 TTAATTGATCAACGCCTTCTCCACCATAATTGTGC-TTAAGACCTTGATATTCTGCTCCA 97413 ||| || |||| |||| || | | ||| | | ||||| || || |||||| Sbjct 176762 CTAACTGGTCAATTCCTTTATTTTTAT-AGTCTGCATGCATACCTTTGTACTCAGCTCCA 176704 Query 97414 AAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAA 97473 ||||| |||||||| || ||||| | || || | || |||||||||||||| | Sbjct 176703 AAATGTCTCCATTGAAAACCATATATCGGACCTAAATCACCTTCTTCTCTATCTTTTAGG 176644 Query 97474 CCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCAC-ACCAGAT-G 97531 |||| ||||| | || | | |||||| |||||||| || || || | Sbjct 176643 CCAACGGAGTCTAAGAACTGTCTTGTACTATTTGCGTCCCAAATATGAACTTTTTTATCG 176584 Query 97532 CTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACAC 97591 || || || | | ||| |||||| |||||||| | | ||||| ||||| | Sbjct 176583 CT--TAGTTCAAAGGCATTCGTACTTCCTCTAATAAACCAGAGTAGCTCTTCGACAACGC 176526 Query 97592 CTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 ||||||||||||| || || |||||||| | |||||| Sbjct 176525 CTCTCCAAAATACCCTTTTCGTTGTTAATAAAGGAAA 176489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346680904693010