Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq792 120 3e-22 seq318 114 1e-20 seq805 89.7 4e-13 >seq792 Length=424820 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | ||||| | || | |||| || ||||| || ||||| ||||| ||| Sbjct 97154 TACCTCCCCTCAATCTGAGGACGAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGG 97095 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| |||||||||||||||||| |||| | | |||||||| || | Sbjct 97094 AAAGAGTTCGACCATCTTCGAGCTGTTTTCCAGCGAAGATCAATCTTTGCTGATCTGGGG 97035 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| || || || || | ||||| |||||| | | |||| Sbjct 97034 GGATCCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTGTCAGAGGGTTCGA 96975 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | || || || || || ||||| || ||||| ||||| Sbjct 96974 CCTCGAGGGTGATGGTCTTACCCGTGAGTGTTTTAACGAAAATTTGCAT 96926 >seq318 Length=663677 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| ||| || |||||||||||||| ||||| || || || ||| || Sbjct 605668 ACCAAGTGGAGTGTGGATTCTTTTTGAATGTTATAATCTGACAAGGTTCGGCCATCTTCC 605609 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||||||||| |||| | | || || || || || || || ||||| ||| Sbjct 605608 AGTTGTTTTCCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATTCCTTCCTTATCTTGG 605549 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || |||||| | |||| |||||| | || | || ||||| | ||| | ||||| Sbjct 605548 ATCTTGGCTTTAACATTCTCGATGGTGTCAGATGGT-TCAACCTCAAGGGTGATAGTTTT 605490 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| ||||| ||||| |||||||| Sbjct 605489 ACCAGTCAGCGTTTTCACAAAGATCTGCAT 605460 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | |||||| ||||| |||||||| ||||| || || | ||| || Sbjct 605896 ACCAAGTGAAGTGTAGATTCTTTCTGAATGTTATAATCAGACAAGGTTCTGCCATCTTCC 605837 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || |||||||||||| |||| | | || || || || || || || |||||||| | Sbjct 605836 AGTTGTTTTCCAGCGAAGATCAATCTTTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGA 605777 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | |||| |||||| | || | || || || | ||| | || || Sbjct 605776 ATTTTGGCTTTTACATTCTCGATGGTGTCGGATGGT-TCCACTTCCAAGGTAATGGTCTT 605718 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || |||||||| ||||| |||||||| Sbjct 605717 TCCAGTTAGAGTTTTGACAAAGATCTGCAT 605688 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||||| ||||| |||||||| ||||| || || || ||| || Sbjct 606352 ACCAAATGAAGCGTAGATTCTTTCTGAATGTTATAATCTGACAAGGTTCGGCCATCTTCC 606293 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || |||||||||||| |||| | | || || || || || |||||||| |||||| Sbjct 606292 AGTTGTTTTCCAGCGAAGATCAATCTTTGTTGGTCTGGGGGAATGCCCTCTTTGTCTTGG 606233 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | |||| |||||| | || | || || || | ||| | || || Sbjct 606232 ATTTTAGCTTTCACGTTCTCGATGGTGTCGGATGGT-TCAACTTCCAAGGTAATTGTCTT 606174 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || |||||||| ||||| |||||||| Sbjct 606173 TCCAGTTAGAGTTTTGACAAAGATCTGCAT 606144 Score = 100 bits (110), Expect = 2e-16 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATA--GTGCGCGTATCCT 118587 |||||||| | |||||| ||||| |||||||| ||||| | ||| || || ||| | Sbjct 606124 ACCAAGTGAAGTGTAGATTCTTTCTGAATGTTATAATC--TGATAAGGTTCGGCCATCTT 606067 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | || ||||||||||| |||| | | || || || || || |||||||| |||||| Sbjct 606066 CCAGTTGTTTTCCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATGCCCTCTTTGTCTT 606007 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTT 118706 ||||| ||| || | |||| |||||| | || | || || || | || | || Sbjct 606006 GGATTTTAGCTTTCACGTTCTCGATGGTGTCAGATGGT-TCAACTTCTAACGTTATGGTC 605948 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || | |||||| ||||| |||||||| Sbjct 605947 TTTCCAGTTAAAGTTTTGACAAAGATCTGCAT 605916 >seq805 Length=567825 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 118527 AACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCC 118586 || |||||||||| ||| || ||| | |||||||| ||| | || || || ||| Sbjct 473801 AAAACCAAGTGGAGTGTGGATTCTCTCTGAATGTTATAAGCTGACAAGGTTCGGCCATCT 473742 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || || |||||||||||| |||| | | || || || || || |||||||| |||||| Sbjct 473741 TCCAGTTGTTTTCCAGCGAAGATCAATCTTTGTTGGTCTGGCGGAATGCCCTCTTTGTCT 473682 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGT 118705 ||||| ||| || | |||| |||||| | || | || || || | || | || Sbjct 473681 TGGATTTTAGCTTTCACGTTCTCGATGGTGTCAGATGGT-TCAACTTCTAACGTTATGGT 473623 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || |||||| ||||| || ||||| Sbjct 473622 CTTTCCAGTTGAAGTTTTGACAAATATTTGCAT 473590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433701426695956