Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq253 86.0 4e-12 >seq253 Length=804807 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 || ||||| | |||| ||| || ||||| |||||||| |||| ||| | || ||| Sbjct 281386 ACAAGGTGAAGAGTAGATTCCTTTTGTATATTGTAGTCCGACAAAGTACGTCCATCTTCC 281445 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300 || || || || || ||||| | ||||| || || || | | |||||||| Sbjct 281446 AATTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGTGGAATTCCCTCCTTGTTTTGA 281505 Query 34301 ATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTG 34360 ||||| ||| | || | || | ||| | | |||||| || | |||||||| || Sbjct 281506 ATCTTAGCCTTAACATTTTCGATGGTATCCGAAGGTTCGACCTCAAGAGTGATGGTCTTA 281565 Query 34361 CCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || | |||||| ||||||||||||||| Sbjct 281566 CCAGTCAAAGTTTTAACAAAGATCTGCATC 281595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322975954026080