Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq318 96.9 3e-15 >seq318 Length=663677 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCGT 45185 |||||||| || || || ||||||||||| || || || ||| | | || | Sbjct 605896 ACCAAGTGAAGTGTAGATTCTTTCTGAATGTTATAATCAGACAAGGTT--CTGCCATCTT 605839 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 ||||||||||||| ||||| ||||| | |||||||| || || | || ||||||||| Sbjct 605838 CCAGTTGTTTTCCAGCGAAGATCAATCTTTGTTGGTCTGGGGGAATTCCTTCCTTGTCCT 605779 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 |||||| || || | | | | |||| ||||| |||| |||||| |||| Sbjct 605778 GAATTTTGGCTTTTACATTCTCGATGGTGTCGGATGGTTCCACTTCCAAGGTAATGGTCT 605719 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || ||||| || |||||||| ||||| Sbjct 605718 TTCCAGTTAGAGTTTTGACAAAGATCTGCAT 605688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394957748217253