Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq318 84.2 2e-11 >seq318 Length=663677 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 ||||| || || ||| ||||||||||| |||||||| || || |||| ||| Sbjct 605668 ACCAAGTGGAGTGTGGATTCTTTTTGAATGTTATAATCTGACAAGGTTCGGCCATCTTCC 605609 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | ||||||||| ||||| ||||| | ||| ||||| | || | ||||| |||||| Sbjct 605608 AGTTGTTTTCCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATTCCTTCCTTATCTTGG 605549 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || ||| || | | | || || | || || || || | || || |||||| Sbjct 605548 ATCTTGGCTTTAACATTCTCGATGGTGTCAGATGGTTCAACCTCAAGGGTGATAGTTTTA 605489 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | || |||||||| || ||||| Sbjct 605488 CCAGTCAGCGTTTTCACAAAGATCTGCAT 605460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354672128278164