Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq318 98.7 8e-16 >seq318 Length=663677 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || |||||||||||||| || ||||| ||||| || ||| | ||||||| Sbjct 605896 ACCAAGTGAAGTGTAGATTCTTTCTGAATGTTATAATCAGACAAGGTTCTGCCATCTTCC 605837 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | |||||| || || | || | || ||||| || ||| | ||||| ||||| | Sbjct 605836 AGTTGTTTTCCAGCGAAGATCAATCTTTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGA 605777 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| ||| || | | | | ||| |||||| ||||| ||||||||| || Sbjct 605776 ATTTTGGCTTTTACATTCTCGATGGTGTCGGATGGTTCCACTTCCAAGGTAATGGTCTTT 605717 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || | ||||||||||| || ||||| Sbjct 605716 CCAGTTAGAGTTTTGACAAAGATCTGCAT 605688 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 19977 ATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAAT 20036 |||| ||||||| | | | |||||||| || ||||||||||| || ||||| |||| Sbjct 606375 ATTTGCCTCCTCTGAGACGAAGAACCAAATGAAGCGTAGATTCTTTCTGAATGTTATAAT 606316 Query 20037 CGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGA 20096 | || ||| |||||||| |||||| || || | || | || ||||| || Sbjct 606315 CTGACAAGGTTCGGCCATCTTCCAGTTGTTTTCCAGCGAAGATCAATCTTTGTTGGTCTG 606256 Query 20097 CGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTT 20156 ||| | ||| |||||||| ||||| |||||| | | | | ||| |||| Sbjct 606255 GGGGAATGCCCTCTTTGTCTTGGATTTTAGCTTTCACGTTCTCGATGGTGTCGGATGGTT 606196 Query 20157 CCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 | ||||| |||||| || || || || | ||||||||||| || ||||| Sbjct 606195 CAACTTCCAAGGTAATTGTCTTTCCAGTTAGAGTTTTGACAAAGATCTGCAT 606144 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || |||||||||||||| || ||||| ||||| | ||| ||||||| Sbjct 606124 ACCAAGTGAAGTGTAGATTCTTTCTGAATGTTATAATCTGATAAGGTTCGGCCATCTTCC 606065 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | |||||| || ||| | || | || ||||| || ||| | ||| |||||||| Sbjct 606064 AGTTGTTTTCCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATGCCCTCTTTGTCTTGG 606005 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| |||||| | | | | || ||||| ||| | || ||||| || Sbjct 606004 ATTTTAGCTTTCACGTTCTCGATGGTGTCAGATGGTTCAACTTCTAACGTTATGGTCTTT 605945 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || || || ||||||||||| || |||||| Sbjct 605944 CCAGTTAAAGTTTTGACAAAGATCTGCATT 605915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419462461052433