Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_006647.1 Length=8785 Score E Sequences producing significant alignments: (Bits) Value seq10249 141 5e-30 seq969 138 6e-29 >seq10249 Length=23757 Score = 141 bits (156), Expect = 5e-30 Identities = 92/100 (92%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 1096 GTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGGTGAAAACAATAACTTCCCGAT 1155 |||||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||| Sbjct 22908 GTCGAGATCTAATGAAAACTTTATTTTTGTAAAACGGGGTGAAACCAATAACTTCCCGAT 22849 Query 1156 TTTT-GAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194 |||| ||||||||| |||||||||||||||||||||||| Sbjct 22848 TTTTCGAAAATCTTTGATTTTCTTAGCGGGAAGTTAAAAA 22809 >seq969 Length=257037 Score = 138 bits (152), Expect = 6e-29 Identities = 96/108 (89%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 1088 CTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGGTGAAAACAATAAC 1147 || ||||| ||||||||| || |||||| ||| |||| |||||||||| ||| ||||||| Sbjct 125977 CTCAAAACATCGAGATCTAATAAAAACTTGATATTTGTAAAACGGGGTAAAACCAATAAC 126036 Query 1148 TTCCCGATTTTT-GAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194 |||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 126037 TTCCCGATTTTTCGAAAATCTTTGATTTTCTTAGCGGGAAGTTAAAAA 126084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27989117083148