Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_006662.1 Length=17477 Score E Sequences producing significant alignments: (Bits) Value seq1025 118 1e-22 >seq1025 Length=248832 Score = 118 bits (130), Expect = 1e-22 Identities = 122/157 (78%), Gaps = 11/157 (7%) Strand=Plus/Minus Query 4751 AAATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCATATG 4810 ||||| |||||||||||||||||||||| || ||| ||||||||||||| || || Sbjct 181796 AAATAATATATTACACTACAAGGGCAGACAGCTTGAAATTCCTGCACTGCACGTCA---- 181741 Query 4811 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAA-ATTTCTGCCCA 4869 |||||||| |||| ||||| |||||| || | |||||||||| |||| |||||| | Sbjct 181740 CCCGAGGCAAAGCTGAGGGAATCATG--ACACCGTTCAGGGCTGTCAAGCTTTCTGTTCG 181683 Query 4870 TGTAGTG----TATACTAGTTTTCTTACTATGCGGTC 4902 ||| ||| ||||||| | ||||| || ||||| Sbjct 181682 TGTGGTGTAGCTATACTATTATTCTTTATAACCGGTC 181646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 55792259684960