Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq39 87.8 3e-12 >seq39 Length=1492389 Score = 87.8 bits (96), Expect = 3e-12 Identities = 121/165 (73%), Gaps = 6/165 (4%) Strand=Plus/Minus Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005 ||| ||||| ||||| |||||| |||||||||||| || || ||||| || || || || Sbjct 436727 TGGCATTCTTTTCAACCACGAAAGTCCAAGAAGAGGAGAAACCTTTGTTACGCGAAAAAT 436668 Query 194006 TACACAAGGTTTATCTAAGATCTCTGTTGG--ATTACAGAAGATTCTT-TATCTTGGTAA 194062 || || || | |||||| | |||| || | || |||||| | |||||||| Sbjct 436667 AACTAGAGAAGTAGCAAAGATC-CACTTGGGCATATCTGA--ATTCTTGGAACTTGGTAA 436611 Query 194063 TCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGA 194107 | | |||| || || ||||||||||| || || |||||||| || Sbjct 436610 TTTAGATGCAAAAAGAGATTGGGGACATGCCAAAGATTATGTAGA 436566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807308966325080