Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq318 113 4e-20 >seq318 Length=663677 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||||||||| || || ||||| ||||||||| | ||| ||| | | Sbjct 605688 ATGCAGATCTTTGTCAAAACTCTAACTGGAAAGACCATTACCTTGGAAGTGGAACCATCC 605747 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | |||||| |||||| || || ||||| | ||| || || Sbjct 605748 GACACCATCGAGAATGTAAAAGCCAAAATTCAGGACAAGGAAGGAATTCCCCCAGACCAA 605807 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||| | || | || || |||||| | ||||||| || |||| || | ||||||||| Sbjct 605808 CAAAGATTGATCTTCGCTGGAAAACAACTGGAAGATGGCAGAACCTTGTCTGATTATAAC 605867 Query 115466 ATTCAAAAAGAGTCTAC 115482 ||||| ||||| ||||| Sbjct 605868 ATTCAGAAAGAATCTAC 605884 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||||||||| || || ||||| || |||||| | ||| || | | Sbjct 606144 ATGCAGATCTTTGTCAAAACTCTAACTGGAAAGACAATTACCTTGGAAGTTGAACCATCC 606203 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | || ||| ||||| || ||||| ||| | ||| || || Sbjct 606204 GACACCATCGAGAACGTGAAAGCTAAAATCCAAGACAAAGAGGGCATTCCCCCAGACCAA 606263 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||| | || | || || |||||| | ||||||| | |||| || | ||||||||| Sbjct 606264 CAAAGATTGATCTTCGCTGGAAAACAACTGGAAGATGGCCGAACCTTGTCAGATTATAAC 606323 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||| ||||| ||||| | ||| |||| Sbjct 606324 ATTCAGAAAGAATCTACGCTTCATTTGGT 606352 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||||||||| | || ||||| ||||| || | ||| || ||| Sbjct 605915 AATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACGTTAGAAGTTGAA-CCAT 605973 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| | | | || ||| ||||| || ||||| ||| | ||| || | Sbjct 605974 CTGACACCATCGAGAACGTGAAAGCTAAAATCCAAGACAAAGAGGGCATTCCCCCAGACC 606033 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | |||||| | || | ||| || |||||| | ||||||| | |||| | | ||||||| Sbjct 606034 AACAAAGATTGATCTTTGCTGGAAAACAACTGGAAGATGGCCGAACCTTATCAGATTATA 606093 Query 115464 ACATTCAAAAAGAGTCTAC 115482 ||||||| ||||| ||||| Sbjct 606094 ACATTCAGAAAGAATCTAC 606112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425217549615160