Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq74 257 2e-63 seq318 87.8 2e-12 seq304 87.8 2e-12 >seq74 Length=1577532 Score = 257 bits (284), Expect = 2e-63 Identities = 474/690 (69%), Gaps = 14/690 (2%) Strand=Plus/Minus Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162 || || ||| | || || | |||||||| |||||||||||||| || || | || || Sbjct 1096374 TTCGAGGTGTAAGGCTCGATGGACTCGTTGTTGCCCAGGATTTGCGCAGTAGACGCAGTA 1096315 Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222 |||||| || | || || |||||||| | || ||||| ||| | ||||| | Sbjct 1096314 GGCATGGGAGCGAGTAACAAGGAATTGCGTACCCCATGCTTGGCGATTTTCTCCTTCAAA 1096255 Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282 | | ||| ||||| || ||||| | ||| ||||||||||||||||||| || || Sbjct 1096254 GCAGACCAGTCCCAGAGATCTGTCGGAGTAACGCCCCACATGTCGTACTGCAAGATACCT 1096195 Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAA 145342 | ||| | || ||||||| ||| ||| ||| | | ||| || |||||| Sbjct 1096194 TTGCTTACAGGACTGCCTTCGTAGGTCGAATAAGGGCCGTCTTTCTCGGCTAGTTCGCAA 1096135 Query 145343 CTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCT 145402 ||||||||||| || || | || | || ||| |||||| | || | || ||| Sbjct 1096134 CTCGCCTCCAGGGCCGCGTAGTAGAGGGTTTCGAATATTTGCTTATTCAAAAGTGCCGCC 1096075 Query 145403 TCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCC 145462 | ||||| ||| | |||||||||| || | || || || || | |||||| || || Sbjct 1096074 TGTTCGCTATCGAAGGGCATGCGCATGAGGATGAACGCGTCCGCTAACCCCTGGATCCCG 1096015 Query 145463 ACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATA-TCG 145518 | ||||||||||| ||| |||| || || |||||| |||| || || || | | Sbjct 1096014 ATTCCGATGGGCCGGTGTCTCATATTCGACAGCCTCGC---CTCGGGTATGGGGTAGTAG 1095958 Query 145519 ATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTT 145578 | || |||||| ||||| | |||||| | | || ||||| || || | | |||||| Sbjct 1095957 TTCAC-GTCGATTATTTTGTCCAAGTTCCTGGCGACCACCTTAGTTATTTCTCTCAACTT 1095899 Query 145579 TTCAAAGTCAAACCGAGCCTCGTCAACGACC---ACACAGCTATTGACGGCGATCGACGC 145635 | || || | | ||| | || | ||| | | ||||| ||||| || || Sbjct 1095898 CTGGAAATCGTA---TGTCTCACGATCGGGCTTTACAAACATGTTGACAGCGATGGAGGC 1095842 Query 145636 CAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT 145695 ||| || || || || ||| |||| | | | || | | ||||| | |||||| || Sbjct 1095841 CAAGTTGCACACAGCGACCTCATCGGGGGAGGTATACTCGATAATCTCCGTGCACAAGTT 1095782 Query 145696 GCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTA 145755 ||| | ||||| || || ||||| ||||| ||||||||||||||||| ||||||||||| Sbjct 1095781 GCTGCTCTTGATCGTGCCAAGATTCTGCTGGTTACTTTTCCTGTTGCAAGCGTCCTTGTA 1095722 Query 145756 GAGCATGTACGGTCCGCCAGTCTCCACCTG 145785 ||||||||| || |||||||| ||||| Sbjct 1095721 GAGCATGTATGGAGTACCAGTCTCTACCTG 1095692 Score = 251 bits (278), Expect = 7e-62 Identities = 473/690 (69%), Gaps = 14/690 (2%) Strand=Plus/Minus Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162 || || ||| | || || | |||||||| |||||||||||||| || || | || || Sbjct 1093043 TTCGAGGTGTAAGGCTCGATGGACTCGTTGTTGCCCAGGATTTGCGCAGTAGACGCAGTA 1092984 Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222 |||||| || | || || |||||||| | || ||||| ||| | ||||| | Sbjct 1092983 GGCATGGGAGCGAGTAACAAGGAATTGCGTACCCCATGCTTGGCGATTTTCTCCTTCAAA 1092924 Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282 | | ||| ||||| || ||||| | ||| ||||||||||||||||||| || || Sbjct 1092923 GCAGACCAGTCCCAGAGATCTGTCGGAGTAACGCCCCACATGTCGTACTGCAAGATACCT 1092864 Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAA 145342 | ||| | || ||||||| ||| ||| ||| | | ||| || |||||| Sbjct 1092863 TTGCTTACAGGACTGCCTTCGTAGGTCGAATAAGGGCCGTCTTTCTCGGCTAGTTCGCAA 1092804 Query 145343 CTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCT 145402 ||||||||||| || || | || | || ||| |||||| | || | || ||| Sbjct 1092803 CTCGCCTCCAGGGCCGCGTAGTAGAGGGTTTCGAAGATTTGCTTATTCAAAAGTGCCGCC 1092744 Query 145403 TCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCC 145462 | ||||| ||| | |||||||||| || | || || || || | |||||| || || Sbjct 1092743 TGTTCGCTATCGAAGGGCATGCGCATGAGGATGAACGCGTCCGCTAACCCCTGGATCCCG 1092684 Query 145463 ACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATA-TCG 145518 | ||||||||||| ||| |||| || || |||||| |||| || || || | | Sbjct 1092683 ATTCCGATGGGCCGGTGTCTCATATTCGACAGCCTCGC---CTCGGGTATGGGGTAGTAG 1092627 Query 145519 ATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTT 145578 | || |||||| ||||| | |||||| | | || ||||| || || | | |||||| Sbjct 1092626 TTCAC-GTCGATTATTTTGTCCAAGTTCCTGGCGACCACCTTAGTTATTTCTCTCAACTT 1092568 Query 145579 TTCAAAGTCAAACCGAGCCTCGTCAACGACC---ACACAGCTATTGACGGCGATCGACGC 145635 | || || | | ||| | || | ||| | | ||||| ||||| || || Sbjct 1092567 CTGGAAATCGTA---TGTCTCACGATCGGGCTTTACAAACATGTTGACAGCGATGGAGGC 1092511 Query 145636 CAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT 145695 ||| || || || || ||| |||| | | | || | | ||||| | |||||| || Sbjct 1092510 CAAGTTGCACACAGCGACCTCATCGGGGGAGGTATACTCGATAATCTCCGTGCACAAGTT 1092451 Query 145696 GCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTA 145755 ||| | ||||| || || ||||| ||||| ||||||||||||||||| || |||||||| Sbjct 1092450 GCTGCTCTTGATCGTGCCAAGATTCTGCTGGTTACTTTTCCTGTTGCAAGCATCCTTGTA 1092391 Query 145756 GAGCATGTACGGTCCGCCAGTCTCCACCTG 145785 ||||||||| || |||||||| ||||| Sbjct 1092390 GAGCATGTAAGGAGTACCAGTCTCTACCTG 1092361 >seq318 Length=663677 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || || || || |||||||| ||||| | Sbjct 605914 CCACCACGGAGACGGAGAACCAAGTGAAGTGTAGATTCTTTCTGAATGTTATAATCAGAC 605855 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | || | || || || || || || ||| |||| || | || ||||| || || Sbjct 605854 AAGGTTCTGCCA-TCTTCCAGTTGTTTTCCAGCGAAGATCAATCTTTGTTGGTCTGGGGG 605796 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 |||||||| ||||| ||| ||| |||| | | ||| | || |||| | || | Sbjct 605795 AATTCCTTCCTTGTCC-TGAATTTTGGCTTTTACATTCTCGATGGTGTCGGATGGTTCCA 605737 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| || || ||||||||||| || || |||||||| Sbjct 605736 CTTCCAAGGTAATGGTCTTTCCAGTTAGAGTTTTGACAAAGATCTGCAT 605688 >seq304 Length=657134 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 145679 ATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTG 145738 ||||| | |||||| ||||| | |||||| | | ||||| ||||| |||||||| ||| Sbjct 341512 ATCTCCGTGCACAAGTTGCTGCTTTTGATCATGCTAAGATTCTGCTGGTTACTTTTTCTG 341453 Query 145739 TTGCACGCGTCCTTGTAGAGCATGTA 145764 ||||| |||||||||||||| ||||| Sbjct 341452 TTGCAAGCGTCCTTGTAGAGTATGTA 341427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471868877397120