Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq74 262 4e-65 >seq74 Length=1577532 Score = 262 bits (290), Expect = 4e-65 Identities = 950/1459 (65%), Gaps = 28/1459 (2%) Strand=Plus/Minus Query 153009 AGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAA 153068 || |||| ||||| || |||||||| || || ||||| || | | || | || Sbjct 1096440 AGATCATTGATCAGGTGTTGGTTGACAACCTGGAACTCCCCAGAAAGGACCCTCCTGGTG 1096381 Query 153069 TATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTT 153128 || | ||| ||| |||| || | ||| ||||| ||||| || ||||| || || | Sbjct 1096380 TAGATATTCGAGGTGTAAGGCTCGATGGACTCGTTGTTGCCCAGGATTTGCGCAGTAGAC 1096321 Query 153129 GCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCT-CGAATGTCGTC 153187 || || |||||| || | ||||| ||||| || | || ||| ||| | || || Sbjct 1096320 GCAGTAGGCATGGGAGCGAGTAACAAGGAATTGCGTACCCCATGCTTGGCGATTTTC-TC 1096262 Query 153188 CTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAA 153247 |||||| || ||| ||||| || | | ||| || || ||||||||||||||| || Sbjct 1096261 CTTCAAAGCAGACCAGTCCCAGAGATCTGTCGGAGTAACGCCCCACATGTCGTACTGCAA 1096202 Query 153248 CACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAG 153307 | ||| || | |||||||| | | || || |||||| | ||| || Sbjct 1096201 GATACCTTTGCTTACAGGACTGCCTTCGTAGGTCGAATAAGGGCCGTCTTTCTCGGCTAG 1096142 Query 153308 TTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAAC 153367 |||||| || ||||| || || | ||||| | ||||||| ||||| ||||| | || Sbjct 1096141 TTCGCAACTCGCCTCCAGGGCCGCGTAGTAGAGGGTTTCGAATATTTGCTTATTCAAAAG 1096082 Query 153368 GGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTG 153427 ||||| | |||||| ||| | |||||||||| || | || ||||| || | ||||| Sbjct 1096081 TGCCGCCTGTTCGCTATCGAAGGGCATGCGCATGAGGATGAACGCGTCCGCTAACCCCTG 1096022 Query 153428 GATACCGACGCCGATGGGTCGATGCTTCTCGT-TGCTGC-GCCTCGCGCTC-GCTATGGG 153484 ||| |||| |||||||| || || |||| | | | | ||||||| ||| | |||||| Sbjct 1096021 GATCCCGATTCCGATGGGCCGGTG--TCTCATATTCGACAGCCTCGC-CTCGGGTATGGG 1095965 Query 153485 ATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTT 153544 |||| || ||||| ||||||| | ||| | | ||||| |||||||| | | Sbjct 1095964 GTAGTAGTTCACGTCGATTATTTTGTCCAAGTTCCTGGCGACCACCTTAGTTATTTCTCT 1095905 Query 153545 AAGTTTCTCGAAATCATAGGTCATTTCG-TCGACGCGTACGCATCGATTCACGGCAATAG 153603 | |||| |||||| || ||| | || ||| ||| | || || || || | Sbjct 1095904 CAACTTCTGGAAATCGTATGTC-TCACGATCGGGCTTTACAAACATGTTGACAGCGATGG 1095846 Query 153604 ACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGA 153663 | |||| || || || || ||| |||| | | | |||| | ||||| | ||| | Sbjct 1095845 AGGCCAAGTTGCACACAGCGACCTCATCGGGGGAGGTATACTCGATAATCTCCGTGCACA 1095786 Query 153664 GGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTT 153723 |||||||| || || ||| | ||| ||||| || ||||| | ||||| ||||| | Sbjct 1095785 AGTTGCTGCTCTTGATCGTGCCAAGATTCTGCTGGTTACTTTTCCTGTTGCAAGCGTCCT 1095726 Query 153724 TGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGCAGGT 153783 || |||||||||| || || ||||| || || | | | ||| | || || Sbjct 1095725 TGTAGAGCATGTATGGAGTACCAGTCTCTACCTGGGATACAGTGATGGCTTTCCACACGT 1095666 Query 153784 CCTGCGCTCGCACCCG-CTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGC 153842 | | || | | | | ||| ||| | ||| || |||||| || || || || | Sbjct 1095665 CACGTGCCGGTAACTGCCTGACGA-ACTTGCCTTCAGCCTCGTAGCGTTCATAGAGCTTC 1095607 Query 153843 TCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGAC 153902 |||||||| ||||| |||| |||| || || | ||||||| |||||||| ||| Sbjct 1095606 TCAAACTCCTCGCCCCAGCAATCGGAAAGCCCCTTGGAGCGATGCGGGCACATCAGAGAC 1095547 Query 153903 CACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATG 153962 || || |||| || | ||| | |||||||| || || | ||| | ||||| | Sbjct 1095546 CAAGTACCGTCAGCCTCGACCCTCTTCATGAACAAGTCAGGGATCCACATAGCGTAGAAT 1095487 Query 153963 AGGTCGC--GCGC-CTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGA-GCACGCT 154018 || || | |||| || ||| | | || |||| ||||| | || | || | Sbjct 1095486 AGTTCCCTGGCGCGATTAATATCTTTC---CCGGTGTTCTTCTTCAGGTCGAGGAACTCC 1095430 Query 154019 ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACC---TTTACGCTTTCC 154075 | | ||||| || ||||| || || | ||| | || | || || | | || || Sbjct 1095429 A-AAATGTCCGCATGCCACGGCTCTAGGTAAATAGCAAACGCCCCAGGTCTCTTGTTGCC 1095371 Query 154076 GCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCT 154135 ||||||||||||| | | || |||||||||| || | || | || | | ||| | Sbjct 1095370 TCCCTGATCGACGTACCTCGCCGTATTGTTGAACACCCTCAGTAGAGGGACGA-GCCCAT 1095312 Query 154136 TGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAAC 154195 || | | | | || | |||| | ||| ||| || | | |||||||| || Sbjct 1095311 TG-GATTTTG-CGATCCTGTCAATCTCGGTGCTCTTGGCTCGTATGTTGTGCACGTTCAC 1095254 Query 154196 GCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCC 154255 ||| || || || || ||||||| || | ||||| | ||| | || | || Sbjct 1095253 GCCGATCCCTCCCGCGGACTTTGAAATAACGGCGCACCTGGACAGACACTTGCTCACCCC 1095194 Query 154256 GTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGT 154315 || | ||| || || | | |||||||| || ||| ||| ||| || | || Sbjct 1095193 CTCCAAGCTGTCTTCCGGCATCATTAGCAAGAAGCAAGAAGACAGTTGAGGTCGTGGAGT 1095134 Query 154316 TCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGT-AAACAGTTTTTGGCTCATCATGCGGT 154374 | ||||| || | || || || || ||||| ||| | || | | ||||| | || Sbjct 1095133 GGCAGCCGAGAACAAAGTAGGGCTAGCATGCGTGAAATACTTCTCCG-ACATCAAGTTGT 1095075 Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434 | || | || || | || || || |||||||| || |||| |||||| | ||| | || Sbjct 1095074 AAGTGTTAATAGCTGCGTCTATGTCTTCGCCGTGGATCCCGACCGCGACTCTCATCAACA 1095015 Query 154435 TGTGCTGCGGACGTTCGGC 154453 ||||||| |||||||| || Sbjct 1095014 TGTGCTGAGGACGTTCAGC 1094996 Score = 255 bits (282), Expect = 6e-63 Identities = 1150/1790 (64%), Gaps = 42/1790 (2%) Strand=Plus/Minus Query 152685 TCAACGGTAAACTGTTGTGTGTGCGCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTT 152744 ||||| |||||||| | | || || ||||| || | ||| || ||||| || || Sbjct 1093433 TCAACAGTAAACTGAATCGGCTTGGCAGCTGGCTTGGTTCTCAAGTAGTACATCCCAGTC 1093374 Query 152745 TTGAGGCCGCAGCGCCACGAGTAATTGTGAATCGAAGTCATCACAGCGTACGTCGGTTGC 152804 ||||| || |||| || ||| ||||||| || | | ||||||| | || | Sbjct 1093373 TTGAGACCCTTTTTCCACCCATAGAAGTGCATCGAAGACAGCGCTCCGTACGTAGCTTTC 1093314 Query 152805 GCCACGAACAGATTAAACGATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATC 152864 ||| | ||| || ||||||||||| ||||| || | || |||||||| Sbjct 1093313 TCCATATGGATATTCAAGCTCTGGCTCTGATCGATGAAGGCCCCTCTATCCGCCGCCATG 1093254 Query 152865 TCAATCATG-CGTTTTGCCTTCATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATC 152923 | || || | || ||| |||||||| |||| ||||| | | ||| | | |||| Sbjct 1093253 TTGATAATAACCTTCTGCGAA-ATCTCCCACACGGTCTTGTAAATAGCTTTGAGGTTATC 1093195 Query 152924 CGGTATACCTTCAATGTTCTGAATAGAGCCCTTGTGTGCAAAAATAGCGTT-----TCGT 152978 ||| || || ||||| || ||||| || || || | | ||| | || Sbjct 1093194 CGGAATGCCGGGGATGTTTTGGATAGACCCGAAGTTGGCGAGGACTTGGTTCTTCATGGT 1093135 Query 152979 ATT-TCGGGCGTGTACACGTTCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCAC 153037 || || | | | | | | ||| || |||| ||||| || |||||||| || Sbjct 1093134 ATCGTCCCACAAGGAGGCATCC-GTT-----AGATCATTGATCAGGTGTTGGTTGACAAC 1093081 Query 153038 TTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGA 153097 || ||||| || | | || | || || | ||| ||| |||| || | ||| Sbjct 1093080 CTGGAACTCCCCAGAAAGGACCCTCCTGGTGTAGATATTCGAGGTGTAAGGCTCGATGGA 1093021 Query 153098 TTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGA 153157 ||||| ||||| || ||||| || || | || || |||||| || | ||||| || Sbjct 1093020 CTCGTTGTTGCCCAGGATTTGCGCAGTAGACGCAGTAGGCATGGGAGCGAGTAACAAGGA 1092961 Query 153158 ATTCCGCAAGCCGTGCGCT-CGAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCG 153216 ||| || | || ||| ||| | || |||||||| || ||| ||||| || | | Sbjct 1092960 ATTGCGTACCCCATGCTTGGCGATTTTC-TCCTTCAAAGCAGACCAGTCCCAGAGATCTG 1092902 Query 153217 ACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAA 153276 ||| || || ||||||||||||||| || | ||| || | |||||||| | Sbjct 1092901 TCGGAGTAACGCCCCACATGTCGTACTGCAAGATACCTTTGCTTACAGGACTGCCTTCGT 1092842 Query 153277 ACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGT 153336 | || || |||||| | ||| |||||||| || ||||| || || | |||| Sbjct 1092841 AGGTCGAATAAGGGCCGTCTTTCTCGGCTAGTTCGCAACTCGCCTCCAGGGCCGCGTAGT 1092782 Query 153337 ATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGTACGGCATGC 153396 | | ||||||| |||||| ||||| | || ||||| | |||||| ||| | ||||||| Sbjct 1092781 AGAGGGTTTCGAAGATTTGCTTATTCAAAAGTGCCGCCTGTTCGCTATCGAAGGGCATGC 1092722 Query 153397 GCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCT 153456 ||| || | || ||||| || | |||||||| |||| |||||||| || || ||| Sbjct 1092721 GCATGAGGATGAACGCGTCCGCTAACCCCTGGATCCCGATTCCGATGGGCCGGTG--TCT 1092664 Query 153457 CGT-TGCTGC-GCCTCGCGCTC-GCTATGGGATAGTGATTGCGATCGATAATTTTGTTGA 153513 | | | | | ||||||| ||| | |||||| |||| || ||||| ||||||| | Sbjct 1092663 CATATTCGACAGCCTCGC-CTCGGGTATGGGGTAGTAGTTCACGTCGATTATTTTGTCCA 1092605 Query 153514 GGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCG- 153572 ||| | | ||||| |||||||| | | | |||| |||||| || ||| | || Sbjct 1092604 AGTTCCTGGCGACCACCTTAGTTATTTCTCTCAACTTCTGGAAATCGTATGTC-TCACGA 1092546 Query 153573 TCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCG 153632 ||| ||| | || || || || || |||| || || || || ||| ||| Sbjct 1092545 TCGGGCTTTACAAACATGTTGACAGCGATGGAGGCCAAGTTGCACACAGCGACCTCATCG 1092486 Query 153633 GCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTT 153692 | | | | |||| | ||||| | ||| | |||||||| || || ||| | ||| Sbjct 1092485 GGGGAGGTATACTCGATAATCTCCGTGCACAAGTTGCTGCTCTTGATCGTGCCAAGATTC 1092426 Query 153693 TGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCG 153752 ||||| || ||||| | ||||| || || ||| |||||||||| || || ||||| Sbjct 1092425 TGCTGGTTACTTTTCCTGTTGCAAGCATCCTTGTAGAGCATGTAAGGAGTACCAGTCTCT 1092366 Query 153753 ACTTGCGTTTCGACGATAAACCTATGCAGGTCCTGCGCTCGCACCCG-CTGCCGATAGCG 153811 || || | | | ||| | || ||| | || | | | | ||| ||| | Sbjct 1092365 ACCTGGGATACAGTGATGGCTTTCCACACGTCACGTGCCGGTAACTGCCTGACGA-ACTT 1092307 Query 153812 GCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAG 153871 ||| || |||||| || || || || ||||||||| ||||| |||| || || Sbjct 1092306 GCCTTCAGCCTCGTAGCGTTCATAGAGCTTCTCAAACTCCTCGCCCCAGCAAATGGAAAG 1092247 Query 153872 GCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCAT 153931 || | ||||||| |||||||| ||||| || |||| || | ||| | ||| Sbjct 1092246 CCCCTTGGAGCGATGCGGGCACATCAGAGACCAAGTACCGTCAGCCTCGACCCTCTTCAT 1092187 Query 153932 GAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGC--GCGC-CTTGCAATCCTCCGC 153988 ||||| || || | ||| | ||||| | || || | |||| || ||| | | Sbjct 1092186 GAACAAGTCAGGGATCCACATAGCGTAGAATAGTTCCCTGGCGCGATTAATATCTTTC-- 1092129 Query 153989 GCCCATGTTGCGTTTCAGATTGA-GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGT 154047 || |||| ||||| | || | || | | | ||||| || ||||| || || | || Sbjct 1092128 -CCGGTGTTCTTCTTCAGGTCGAGGAACTCCA-AAATGTCCGCATGCCACGGCTCTAGGT 1092071 Query 154048 AGACGGCCAGGGCACC---TTTACGCTTTCCGCCCTGATCGACGTGGCGCACCATATTGT 154104 | | || | || || | | || || ||||||||||||| | | || |||||| Sbjct 1092070 AAATAGCAAACGCCCCAGGTCTCTTGTTGCCTCCCTGATCGACGTACCTCGCCGTATTGT 1092011 Query 154105 TGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGC 154164 |||| || | || | || | | ||| ||| | | | | || | |||| | Sbjct 1092010 TGAACACCCTCAGTAGAGGGACGA-GCCCATTG-GATTTTG-CGATCCTGTCAATCTCGG 1091954 Query 154165 TGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGG 154224 ||| ||| || | | |||||||| ||||| || || || || ||||||| || Sbjct 1091953 TGCTCTTGGCTCGTATGTTGTGCACGTTCACGCCGATCCCTCCCGCGGACTTTGAAATAA 1091894 Query 154225 CAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCA 154284 | ||||| | ||| | || | || || | ||| || || | | |||| Sbjct 1091893 CGGCGCACCTGGACAGACACTTGCTCACCCCCTCCAAGCTGTCTTCCGGCATCATTAGCA 1091834 Query 154285 AGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGT 154344 |||| || ||| ||| ||| || | || | ||||| || | || || || || | Sbjct 1091833 AGAAGCAAGAAGACAGTTGAGGTCGTGGAGTGGCAGCCGAGAACAAAGTAGGGCTAGCAT 1091774 Query 154345 GCGT-AAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCG 154403 |||| ||| | || | | ||||| | ||| || | || || | || || || ||| Sbjct 1091773 GCGTGAAATACTTCTCCG-ACATCAAGTTGTAAGTGTTAATAGCTGCGTCTATGTCTTCG 1091715 Query 154404 CCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGC 154453 ||||| || |||| |||||| | ||| | ||||||||| |||||||| || Sbjct 1091714 CCGTGGATCCCGACCGCGACTCTCATCAACATGTGCTGAGGACGTTCAGC 1091665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496111083390960