Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq792 104 3e-17 >seq792 Length=424820 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || |||||||||||||| ||||| || | || |||||||| || || ||||| Sbjct 97117 CTCCTTCTGAATATTGTAGTCGGAAAGAGTTCGACCATCTTCGAGCTGTTTTCCAGCGAA 97058 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||||| || | || | | |||||||| |||||| ||||| | Sbjct 97057 GATCAATCTTTGCTGATCTGGGGGGATCCCTTCCTTGTCTTGGATCTTAGCCTTGACGTT 96998 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| | ||| || || | |||||||| || ||||| || |||||||| Sbjct 96997 TTCGATGGTGTCAGAGGGTTCGACCTCGAGGGTGATGGTCTTACCCGTGAGTGTTTTAAC 96938 Query 46582 AAAGATTTGCAT 46593 || |||||||| Sbjct 96937 GAAAATTTGCAT 96926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565066051746360