Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq74 95.1 2e-14 >seq74 Length=1577532 Score = 95.1 bits (104), Expect = 2e-14 Identities = 260/394 (66%), Gaps = 16/394 (4%) Strand=Plus/Plus Query 112089 GATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGC 112148 || || |||| |||| | ||||| || || | ||||||||||| || |||| || Sbjct 1095482 GAACTATTCTACGCTATGTGGATCCCTGACTTGTTCATGAAGAGGGTCGAGGCTGACGGT 1095541 Query 112149 AATTGGTCTCTCTTTTGTCCAGACAAGGCACCC--GGTCTCTCCGATGCCGTGGGTGAGG 112206 | ||||||||| | || || || || || || || |||||| | ||| |||| Sbjct 1095542 ACTTGGTCTCTGATGTGCCCG--CATCGCTCCAAGGGGCTTTCCGATTGCTGGGGCGAGG 1095599 Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG-----T 112261 ||||||| ||||| | ||||||| ||| ||| | | || | | | Sbjct 1095600 AGTTTGAGAAGCTCTATGAACGCTACGAGGCTGAA-----GGCAAGTTCGTCAGGCAGTT 1095654 Query 112262 GCCAGCTGCCGATGTGTGGAAAGCTATT-CTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 || || || ||||||||||| || || | || || ||||||||||| |||| Sbjct 1095655 ACCGGCACGTGACGTGTGGAAAGCCATCACTGTA-TCCCAGGTAGAGACTGGTACTCCAT 1095713 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 | ||||| ||||| ||||| || ||| || ||||| || ||||| | || ||||| Sbjct 1095714 ACATGCTCTACAAGGACGCTTGCAACAGGAAAAGTAACCAGCAGAATCTTGGCACGATCA 1095773 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 |||| |||| | || || || || | || | ||| | |||||| ||||||| Sbjct 1095774 AGAGCAGCAACTTGTGCACGGAGATTATCGAGTATACCTCCCCCGATGAGGTCGCTGTGT 1095833 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 112474 | ||| | || || |||||| || || || ||| Sbjct 1095834 GCAACTTGGCCTCCATCGCTGTCAACATGTTTGT 1095867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620553127882960