Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq272 87.8 2e-12 >seq272 Length=744789 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/238 (68%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 197053 TTACAAATGGATTCGTACATCTGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCG 197112 ||||||||| || || || |||||| | |||||||| | |||||| | ||| Sbjct 561558 TTACAAATGCTTTGATATTCCTCATTGTCGTTGTCATAACAGGCCAATAAGAATCCTCCG 561499 Query 197113 TAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTG 197172 || || || | ||||| || | | ||||| ||||| || | ||| | ||| Sbjct 561498 TAATGACCAGTACGTTTTCCTTTGCCAATATACCCTCCAATAACAACTACATCTATAGTA 561439 Query 197173 TCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCA 197232 || | || ||||||| || || ||||||| ||| | ||| | |||||||| || Sbjct 561438 TCTCCTACTCCTTCCAAATAGTCCTTCTTCAATTTCAACCAATTGTGTGATCTCTTTGCT 561379 Query 197233 ATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATCATCAATCCCTCGCAATCTTCCT 197290 || ||||||||||| | | |||| ||||| | |||||| ||||| |||| ||||| Sbjct 561378 ATTTCGTAGGTTGCATCTTTTTCCAACGTCTTAACCATCAAACCCTCACAAT-TTCCT 561322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676523256685840