Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq74 333 5e-86 seq304 87.8 3e-12 >seq74 Length=1577532 Score = 333 bits (368), Expect = 5e-86 Identities = 912/1375 (66%), Gaps = 69/1375 (5%) Strand=Plus/Minus Query 212686 CCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGT 212745 ||| ||| | |||| | ||| ||||| || ||||| | | || || || ||||||| Sbjct 1093312 CCATATGGATATTCAAGCTCTGGCTCTGATCGATGAAGGCCCCTCTATCCGCCGCCATGT 1093253 Query 212746 CTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTG 212805 || ||| | |||| || | |||||||||||||||| | || ||||||||| || | Sbjct 1093252 TGATAATAACCTTCTGCGAAATCTCCCACACGGTCTTGTAAATAGCTTTGAGGTTATCCG 1093193 Query 212806 GGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGC---ATGT 212862 | | |||||||||||| || | |||||| || ||| || || | ||| Sbjct 1093192 GAATGCCGGGGATGTTTTGGATAGACCCGAAGT---TGGCGAGGACTTGGTTCTTCATGG 1093136 Query 212863 CCTCGTTCCA----GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATC 212918 |||| ||| ||||| | | | || |||| |||||| ||||||| | | Sbjct 1093135 TATCGTCCCACAAGGAGGCATCCGTT----AGATCATTGATCAGGTGTTGGTTGACAACC 1093080 Query 212919 TGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTC 212978 ||||| || || || || |||||||| ||| | || || ||||| ||||||||| | Sbjct 1093079 TGGAACTCCCCAGAAAGGACCCTCCTGGTGTAGATATTCGAGGTGTAAGGCTCGATGGAC 1093020 Query 212979 TCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA----CCAGGAG 213034 |||||||| ||||| || || ||||| || || ||||||||||| | | |||| Sbjct 1093019 TCGTTGTTGCCCAGGATTTGCGCAGTAGACGCAGTAGGCATGGGAGCGAGTAACAAGGAA 1092960 Query 213035 ACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC--CGAAGCTCTGCCCAGTCCCATCTG 213092 || | || || |||| | |||| | | |||| | ||||||||| Sbjct 1092959 ----TTGCGTACCCCATGCTTGGCGATTTTCTCCTTCAAAGCA--GACCAGTCCCAG--- 1092909 Query 213093 CCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACG 213152 ||| ||| || ||| ||||||||| |||||||||| |||||||| || Sbjct 1092908 --AGATCTGTCGGAGTA----ACGCCCCACATGTCGTACTGCAAGATACCTTTGCTTACA 1092855 Query 213153 GGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGC 213212 || ||||| | ||| | || || ||||| | | || ||| || ||||| ||||| | Sbjct 1092854 GGACTGCCTTCGTAGGTCGAATAAGGGCCGTCTTTCTCGGCTAGTTCGCAACTCGCCTCC 1092795 Query 213213 AGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGAC 213272 ||||| |||||||||| |||||| || || | | | || | |||| | | Sbjct 1092794 AGGGCCGCGTAGTAGAGGGTTTCGAAGATTTGCTTATTCAAAAGTGCCGCCTGTTCGCTA 1092735 Query 213273 GTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATG 213332 ||||||||| |||| | |||| | || || | |||||||| |||||| |||||| Sbjct 1092734 TCGAAGGGCATGCGCATGAGGATGAACGCGTCCGCTAACCCCTGGATCCCGATTCCGATG 1092675 Query 213333 GGTCTGTGTCTCAGGTTAGACTTGGAGCA-CTCCTCC---AAGGGGTAAAAGTTGCAGTC 213388 || | |||||||| || ||| ||| | |||| | |||||| |||| ||| Sbjct 1092674 GGCCGGTGTCTCATATTCGAC----AGCCTCGCCTCGGGTATGGGGTAGTAGTTCACGTC 1092619 Query 213389 GATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATT 213448 ||| || |||| | ||| | || | |||| || || | | || | || | || Sbjct 1092618 GATTATTTTGTCCAAGTTCCTGGCGACCACCTTAGTTATTTCTCTCAACTTCTGGAAATC 1092559 Query 213449 GAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAAC 213508 | | | | || || |||||| | |||||| ||||| |||||| || Sbjct 1092558 GTATGTCTCACGATCGGGCTTTACAAACATGTTGACAGCGATGGAGGCCAAGTTGCACAC 1092499 Query 213509 GGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGAT 213568 || ||||| | | | || ||||| || ||||| ||||||| |||||||| ||| Sbjct 1092498 AGCGACCTCATCGGGGGAGGTATACTCGATAATCTCCGTGCACAAGTTGCTGCTCTTGAT 1092439 Query 213569 GGTGCCCAGGTTCTGGTGGTTTGACTTTGC--GTTGGCAGAATCCTTGTAGAGCATGTAG 213626 ||||| || ||||| ||||| ||||| | |||| || |||||||||||||||||| Sbjct 1092438 CGTGCCAAGATTCTGCTGGTT--ACTTTTCCTGTTGCAAGCATCCTTGTAGAGCATGTAA 1092381 Query 213627 GGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGT-ACCTGGCCTTG 213683 || | || ||||||| |||||| | |||| |||| |||| | || || || | | Sbjct 1092380 GGAGTACCAGTCTCTACCTGGGATA-CAGT-GATGGCTTTCCACACGTCACGTGCCGGT- 1092324 Query 213684 ACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTC 213742 | | ||||||| | | | | | ||||||||| |||| ||||||| | || || Sbjct 1092323 ---AACTGCCTGAC-GAACTTGCCTTCAGCCTCGTAGCGTTCATAGAGCTTCTCAAACTC 1092268 Query 213743 GTGGCCCCAGACCCTGTCCAGTCCCGGACAG-GATGCGGGACACATGAGGCTCCAGTCCC 213801 | ||||||| || || ||| || |||||||| ||||| || ||| | Sbjct 1092267 CTCGCCCCAGCAAATGGAAAGCCCCTTGGAGCGATGCGGG-CACATCAGAGACCAAGTAC 1092209 Query 213802 CGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCC 213861 ||||| | ||| |||| |||||||| ||| |||| ||||| ||| ||| || |||| Sbjct 1092208 CGTCAGCCTCGACCCTCTTCATGAACAAGTCAGGGATCCACATAGCGTAGAATAGTTCCC 1092149 Query 213862 TGGTCC---TCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGT 213918 ||| | | | || | | || | ||| || ||| || || || || || |||| Sbjct 1092148 TGGCGCGATTAATATCTTTC---CCGGTGTTCTTCTTCAGGTCGAGGAACTCCAAAATGT 1092092 Query 213919 CCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTC---TTGCCGCCCTGGT 213975 |||| ||||||||||| | ||| || ||||| || || || ||| ||||| ||||| | Sbjct 1092091 CCGCATGCCACGGCTCTAGGTAAATAGCAAACGCCCCAGGTCTCTTGTTGCCTCCCTGAT 1092032 Query 213976 CCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGA 214030 | || ||| ||| ||||||| | | ||| | || || ||||| ||||| Sbjct 1092031 CGACGTACCTCGCCGTATTGTTGAACACCCTCAGTAGAGGGACGAGCCCATTGGA 1091977 Score = 307 bits (340), Expect = 2e-78 Identities = 863/1303 (66%), Gaps = 69/1303 (5%) Strand=Plus/Minus Query 212758 TCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGA 212817 |||| || | |||||||||||||||| | || ||||||||| || || | |||||||| Sbjct 1096571 TCTGCGAAATCTCCCACACGGTCTTGTAAATAGCTTTGAGGTTATCCGGAATGCCGGGGA 1096512 Query 212818 TGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGC---ATGTCCTCGTTCCA-- 212872 |||| || | |||||| || ||| || || | ||| |||| ||| Sbjct 1096511 TGTTTTGGATAGACCCGAAGT---TGGCGAGGACTTGGTTCTTCATGGTATCGTCCCACA 1096455 Query 212873 --GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCT 212930 ||||| | | | || |||| |||||| ||||||| | |||||| || || Sbjct 1096454 AGGAGGCATCCGTT----AGATCATTGATCAGGTGTTGGTTGACAACCTGGAACTCCCCA 1096399 Query 212931 GAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCC 212990 || || |||||||| ||| | || || ||||| ||||||||| ||||||||| ||| Sbjct 1096398 GAAAGGACCCTCCTGGTGTAGATATTCGAGGTGTAAGGCTCGATGGACTCGTTGTTGCCC 1096339 Query 212991 AGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA----CCAGGAGACTGTTCCTCAC 213046 || || || ||||| || || ||||||||||| | | |||| || | || Sbjct 1096338 AGGATTTGCGCAGTAGACGCAGTAGGCATGGGAGCGAGTAACAAGGAA----TTGCGTAC 1096283 Query 213047 TCCGTGCTCGCCGATGAGGCGC--CGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCC 213104 || |||| | |||| | | |||| | ||||||||| ||| ||| Sbjct 1096282 CCCATGCTTGGCGATTTTCTCCTTCAAAGCA--GACCAGTCCCAG-----AGATCTGTCG 1096230 Query 213105 TCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGG 213164 || ||| ||||||||| |||||||||| |||||||| || || ||||| | | Sbjct 1096229 GAGTA----ACGCCCCACATGTCGTACTGCAAGATACCTTTGCTTACAGGACTGCCTTCG 1096174 Query 213165 TAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAG 213224 || | || || ||||| | | || ||| || ||||| ||||| |||||| |||||| Sbjct 1096173 TAGGTCGAATAAGGGCCGTCTTTCTCGGCTAGTTCGCAACTCGCCTCCAGGGCCGCGTAG 1096114 Query 213225 TAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATC 213284 |||| |||||| ||||| | | | || | |||| | | ||||||||| Sbjct 1096113 TAGAGGGTTTCGAATATTTGCTTATTCAAAAGTGCCGCCTGTTCGCTATCGAAGGGCATG 1096054 Query 213285 ATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTC 213344 |||| | |||| | || || | |||||||| |||||| |||||||| | ||||||| Sbjct 1096053 CGCATGAGGATGAACGCGTCCGCTAACCCCTGGATCCCGATTCCGATGGGCCGGTGTCTC 1095994 Query 213345 AGGTTAGACTTGGAGCA-CTCCTCC---AAGGGGTAAAAGTTGCAGTCGATGATCTTGTT 213400 | || ||| ||| | |||| | |||||| |||| |||||| || |||| Sbjct 1095993 ATATTCGAC----AGCCTCGCCTCGGGTATGGGGTAGTAGTTCACGTCGATTATTTTGTC 1095938 Query 213401 GAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCC 213460 | ||| | || | |||| || || | | || | || | || | | | | Sbjct 1095937 CAAGTTCCTGGCGACCACCTTAGTTATTTCTCTCAACTTCTGGAAATCGTATGTCTCACG 1095878 Query 213461 CCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTG 213520 || || |||||| | |||||| ||||| |||||| || || ||||| | Sbjct 1095877 ATCGGGCTTTACAAACATGTTGACAGCGATGGAGGCCAAGTTGCACACAGCGACCTCATC 1095818 Query 213521 AGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTT 213580 | | || ||||| || ||||| ||||||| |||||||| ||| ||||| || || Sbjct 1095817 GGGGGAGGTATACTCGATAATCTCCGTGCACAAGTTGCTGCTCTTGATCGTGCCAAGATT 1095758 Query 213581 CTGGTGGTTTGACTTTGC--GTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 ||| ||||| ||||| | |||| || ||||||||||||||||| || | || ||| Sbjct 1095757 CTGCTGGTT--ACTTTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTATGGAGTACCAGTC 1095700 Query 213639 TCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGT-ACCTGGCCTTGACCACCCGCCTG 213695 |||| |||||| | |||| |||| |||| | || || || | | | | ||||| Sbjct 1095699 TCTACCTGGGATA-CAGT-GATGGCTTTCCACACGTCACGTGCCGGT----AACTGCCTG 1095646 Query 213696 ACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGAC 213754 || | | | | | ||||||||| |||| ||||||| | || || | ||||||| Sbjct 1095645 AC-GAACTTGCCTTCAGCCTCGTAGCGTTCATAGAGCTTCTCAAACTCCTCGCCCCAGCA 1095587 Query 213755 CCTGTCCAGTCCCGGACAG-GATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGA 213813 | || ||| || |||||||| ||||| || ||| |||||| | || Sbjct 1095586 ATCGGAAAGCCCCTTGGAGCGATGCGGG-CACATCAGAGACCAAGTACCGTCAGCCTCGA 1095528 Query 213814 CTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCC---TCC 213870 | |||| |||||||| ||| |||| ||||| ||| ||| || ||||||| | | Sbjct 1095527 CCCTCTTCATGAACAAGTCAGGGATCCACATAGCGTAGAATAGTTCCCTGGCGCGATTAA 1095468 Query 213871 TCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACG 213930 | || | | || | ||| || ||| || || || || || |||||||| ||||||| Sbjct 1095467 TATCTTTC---CCGGTGTTCTTCTTCAGGTCGAGGAACTCCAAAATGTCCGCATGCCACG 1095411 Query 213931 GCTCCATGTAGATGGCAAAGGCGCCCGGCCTC---TTGCCGCCCTGGTCCACCAGCCTGG 213987 |||| | ||| || ||||| || || || ||| ||||| ||||| || || ||| | Sbjct 1095410 GCTCTAGGTAAATAGCAAACGCCCCAGGTCTCTTGTTGCCTCCCTGATCGACGTACCTCG 1095351 Query 213988 CCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGA 214030 || ||||||| | | ||| | || || ||||| ||||| Sbjct 1095350 CCGTATTGTTGAACACCCTCAGTAGAGGGACGAGCCCATTGGA 1095308 >seq304 Length=657134 Score = 87.8 bits (96), Expect = 3e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 212686 CCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGT 212745 ||| ||||| |||| | ||||||||| |||||||| | | | || || ||||||| Sbjct 342348 CCATATGTATATTCAAGCTCTGACTCTGATCTATGAAAGCCCCATTATCCGCCGCCATGT 342289 Query 212746 CTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTG 212805 | ||| | |||| || | |||||||||||||||| | || || |||||| || | Sbjct 342288 TGAGAATAACAGTCTGCGAAATCTCCCACACGGTCTTGTAAATAGCTCTGAGGTTATCCG 342229 Query 212806 GGAAGCCGGGGATGTTCTGCACAGACCC 212833 | | || ||||||||||| | |||||| Sbjct 342228 GAATACCAGGGATGTTCTGGATAGACCC 342201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931248764005120