Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq74 127 4e-24 >seq74 Length=1577532 Score = 127 bits (140), Expect = 4e-24 Identities = 487/753 (65%), Gaps = 39/753 (5%) Strand=Plus/Minus Query 221482 GAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGG 221540 ||||||||| |||| | |||| | |||| || | ||||| | ||||| ||||||| Sbjct 1096063 GAAGGGCATGCGCATGAGGATGAACG-CGTCCGCTAACCCCTGGATCCCGATTCCGATGG 1096005 Query 221541 GCCTGTGTCTCCTGTTGGA-AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATC 221599 ||| ||||||| | || || ||| | || || || | ||| || |||| |||||||| Sbjct 1096004 GCCGGTGTCTCATATTCGACAGCCTC-GCCTCGGGTATGGGGTAGTAGTTCACGTCGATT 1095946 Query 221600 AGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAAC 221659 | |||| | |||| | || || ||| | || ||| ||||||| || | | Sbjct 1095945 ATTTTGTCCAAGTTCCTGGCGACCACCTTAGTTATTTCTCTCAACTTCTGGAAATCGTAT 1095886 Query 221660 ACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGG 221719 | | | ||| || | ||||| ||| | || | | ||||| | Sbjct 1095885 GTCT------CACGATCG------GGCTTTACAAACATGTTGACAGCGATGGAGGCCAAG 1095838 Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779 || ||||| || ||||| || | |||||||| || ||||| || || | ||||||| Sbjct 1095837 TTGCACACAGCGACCTCATCGGGGGAGGTATACTCGATAATCTCCGTGCACAAGTTGCTG 1095778 Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGC 221839 | |||||| || || || | | || ||| || | ||| |||||||||||||||| Sbjct 1095777 CTCTTGATCGTGCCAAGATTCTGCTGGTTACTTTTCCTGTTGCAAGCGTCCTTGTAGAGC 1095718 Query 221840 ATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTC-TGGC 221898 || | ||| |||||||| | ||| | || || | ||| | || | || | Sbjct 1095717 ATGTATGGAGTACCAGTCTCTACCTGGGATACAGTGATGGCTTTCCACACGTCACGTGCC 1095658 Query 221899 GCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952 | | || | ||| |||| || || ||||| |||||| |||| | Sbjct 1095657 GGTAACTG-CCTGACGAACTTGCCTTCAGCCTCGTAGCGTTCATA---------GAGCTT 1095608 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCC--TGGACACCTGGCGGGACACATCAGA 222010 ||||||| || || | ||| || || |||| || |||| ||||||||| Sbjct 1095607 CTCAAACTCCTCGCCCCAGCAATCGGAAAGCCCCTTGGAGCGATG-CGGG-CACATCAGA 1095550 Query 222011 CTCCA-GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069 ||| || | || | | |||||||| |||||| | ||| |||||||||| || | Sbjct 1095549 GACCAAGTACC-GTCAGCCTCGACCCTCTTCATGAACAAGTCAGGGATCCACATAGCGTA 1095491 Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129 || || || |||| || | || ||| |||| ||| |||| || | ||||| Sbjct 1095490 GAATAGTTCCCTGGCGCGATTAATATCTTTCCCGGTGTTCTTCTTCAGGTCGAGGAACTC 1095431 Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189 |||||||| || ||||||||||| || || | || | || || |||| ||||||||| Sbjct 1095430 CAAAATGTCCGCATGCCACGGCTCTAGGTAAATAGCAAACGCCCCAGGTCTCTTGTTGCC 1095371 Query 222190 ACCCTGATCCACCATCCTCTCCAGAGCGTTGAA 222222 |||||||| || |||| || | |||||| Sbjct 1095370 TCCCTGATCGACGTACCTCGCCGTATTGTTGAA 1095338 Score = 113 bits (124), Expect = 8e-20 Identities = 484/753 (64%), Gaps = 39/753 (5%) Strand=Plus/Minus Query 221482 GAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGG 221540 ||||||||| |||| | |||| | |||| || | ||||| | ||||| ||||||| Sbjct 1092732 GAAGGGCATGCGCATGAGGATGAACG-CGTCCGCTAACCCCTGGATCCCGATTCCGATGG 1092674 Query 221541 GCCTGTGTCTCCTGTTGGA-AGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATC 221599 ||| ||||||| | || || ||| | || || || | ||| || |||| |||||||| Sbjct 1092673 GCCGGTGTCTCATATTCGACAGCCTC-GCCTCGGGTATGGGGTAGTAGTTCACGTCGATT 1092615 Query 221600 AGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAAC 221659 | |||| | |||| | || || ||| | || ||| ||||||| || | | Sbjct 1092614 ATTTTGTCCAAGTTCCTGGCGACCACCTTAGTTATTTCTCTCAACTTCTGGAAATCGTAT 1092555 Query 221660 ACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGG 221719 | | | ||| || | ||||| ||| | || | | ||||| | Sbjct 1092554 GTCT------CACGATCG------GGCTTTACAAACATGTTGACAGCGATGGAGGCCAAG 1092507 Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779 || ||||| || ||||| || | |||||||| || ||||| || || | ||||||| Sbjct 1092506 TTGCACACAGCGACCTCATCGGGGGAGGTATACTCGATAATCTCCGTGCACAAGTTGCTG 1092447 Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGC 221839 | |||||| || || || | | || ||| || | ||| ||| |||||||||||| Sbjct 1092446 CTCTTGATCGTGCCAAGATTCTGCTGGTTACTTTTCCTGTTGCAAGCATCCTTGTAGAGC 1092387 Query 221840 ATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTC-TGGC 221898 || | ||| |||||||| | ||| | || || | ||| | || | || | Sbjct 1092386 ATGTAAGGAGTACCAGTCTCTACCTGGGATACAGTGATGGCTTTCCACACGTCACGTGCC 1092327 Query 221899 GCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952 | | || | ||| |||| || || ||||| |||||| |||| | Sbjct 1092326 GGTAACTG-CCTGACGAACTTGCCTTCAGCCTCGTAGCGTTCATA---------GAGCTT 1092277 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCC--TGGACACCTGGCGGGACACATCAGA 222010 ||||||| || || | | || || |||| || |||| ||||||||| Sbjct 1092276 CTCAAACTCCTCGCCCCAGCAAATGGAAAGCCCCTTGGAGCGATG-CGGG-CACATCAGA 1092219 Query 222011 CTCCA-GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069 ||| || | || | | |||||||| |||||| | ||| |||||||||| || | Sbjct 1092218 GACCAAGTACC-GTCAGCCTCGACCCTCTTCATGAACAAGTCAGGGATCCACATAGCGTA 1092160 Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129 || || || |||| || | || ||| |||| ||| |||| || | ||||| Sbjct 1092159 GAATAGTTCCCTGGCGCGATTAATATCTTTCCCGGTGTTCTTCTTCAGGTCGAGGAACTC 1092100 Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189 |||||||| || ||||||||||| || || | || | || || |||| ||||||||| Sbjct 1092099 CAAAATGTCCGCATGCCACGGCTCTAGGTAAATAGCAAACGCCCCAGGTCTCTTGTTGCC 1092040 Query 222190 ACCCTGATCCACCATCCTCTCCAGAGCGTTGAA 222222 |||||||| || |||| || | |||||| Sbjct 1092039 TCCCTGATCGACGTACCTCGCCGTATTGTTGAA 1092007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928561583609920