Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6 102 2e-16 seq74 89.7 2e-12 >seq6 Length=3622483 Score = 102 bits (112), Expect = 2e-16 Identities = 175/251 (70%), Gaps = 6/251 (2%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || | |||||||||||||||||||||| | || |||||||| ||| Sbjct 1363012 TCCATAGCCTTTATGAGACGACGCTGAATATAACCAGTTTCGGCAGTCTTTACAGCGGTA 1362953 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 || || ||||| | ||||| |||||||||||||| | | ||| ||| ||| || Sbjct 1362952 TCGATGAGACCTTCTCGACCTCCCATAGCATGGAAATAAAACTCGGACGGGGTTAGACCG 1362893 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTA 302751 | | | || | || ||||| || | | |||||| || ||||||| || | Sbjct 1362892 GCGAGGTACGAATTTTCTACGAAGCCTCTAGACTCGGGACCGTAATCGTC---TTTTATG 1362836 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 || || |||| || | || | ||| |||| ||||| || || ||||||||||| Sbjct 1362835 AAATGCGGCAACGTGCGCTTGCGGAAACCGAATGGTATACGTTTACCTTCAACGTTCTGT 1362776 Query 302812 TGTCCCAGGCA 302822 || |||| ||| Sbjct 1362775 TGACCCACGCA 1362765 >seq74 Length=1577532 Score = 89.7 bits (98), Expect = 2e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 155568 TTTACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCG 155627 ||||||||||| | | | || || |||| || || || || ||| | | | | Sbjct 1092539 TTTACAAACATGTTGACAGCGATGGAGGCCAAGTTGCACACAGCGACCTCATCGGGGGAG 1092480 Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 | || || | |||||| ||||| ||| |||||||| ||||| | ||||| |||| Sbjct 1092479 GTATACTCGATAATCTCCGTGCACAAGTTGCTGCTCTTGATCGTGCCAAGATTCTGCTGG 1092420 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 ||| ||| ||||| |||||||||||||| || ||||| || || || ||||| | ||| Sbjct 1092419 TTACTTTTCCTGTTGCAAGCATCCTTGTAGAGCATGTAAGGAGTACCAGTCTCTACCTG 1092361 Score = 89.7 bits (98), Expect = 2e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 155568 TTTACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCG 155627 ||||||||||| | | | || || |||| || || || || ||| | | | | Sbjct 1095870 TTTACAAACATGTTGACAGCGATGGAGGCCAAGTTGCACACAGCGACCTCATCGGGGGAG 1095811 Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 | || || | |||||| ||||| ||| |||||||| ||||| | ||||| |||| Sbjct 1095810 GTATACTCGATAATCTCCGTGCACAAGTTGCTGCTCTTGATCGTGCCAAGATTCTGCTGG 1095751 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 ||| ||| ||||| ||||| |||||||| || |||||||| || || ||||| | ||| Sbjct 1095750 TTACTTTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTATGGAGTACCAGTCTCTACCTG 1095692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471357605026441