Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq643 96.9 4e-15 >seq643 Length=490110 Score = 96.9 bits (106), Expect = 4e-15 Identities = 220/321 (69%), Gaps = 19/321 (6%) Strand=Plus/Plus Query 172515 GAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCT 172574 || ||| |||||||||||||||| || || ||||| ||||||||||||||| || ||| Sbjct 176651 GATAGAGAAGAAGGTGATTTAGGTCCGATATATGGTTTTCAATGGAGACATTTTGGAGCT 176710 Query 172575 CAATATATCGACTGTG-ATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAAC 172633 | || | | | || || |||| || | | ||||| | ||||| ||| ||| Sbjct 176711 GAGTACAAAG-GTATGCATGCAGACTATAAAAATAAAGGAATTGACCAGTTAGCTCATGT 176769 Query 172634 TATTAATACTTTACAAAACAACCCAGAAAG-TAGAAGGATGTTAATTGATAGTTGGAATG 172692 || |||||| || ||||||| | || | |||| | || |||| || | ||| Sbjct 176770 AATAAATACTATA-AAAACAAGACCTAATGATAGACGCATCATAAT-----GTGTGCATG 176823 Query 172693 TACCTCAACTTGATA------AAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTT 172746 | | | | |||||| |||||| | |||||||||||| ||| | || |||| Sbjct 176824 GAACCCTA-TTGATATCCCAGAAATGGCATTACCTCCTTGCCATTGTTTGGTCCAGTTTT 176882 Query 172747 ATGTCAGaaaaaaaTCAATCTTAGATTGTCAGTTATATCAAAGATCAGCTGATTTAGGAT 172806 ||| || ||| || || ||| | ||||| | |||||| |||| || ||| | ||| Sbjct 176883 TTGT-AGGAAATGATGAA-CTTTCA-TGTCAACTTTATCAACGATCTGCAGATATGGGAC 176939 Query 172807 TGGGGGTACCTTATAATATTG 172827 | || || |||| |||||||| Sbjct 176940 TTGGAGTGCCTTTTAATATTG 176960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632296746014840