Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2854 84.2 4e-11 >seq2854 Length=58186 Score = 84.2 bits (92), Expect = 4e-11 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 182990 AACAACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGA-TG 183048 ||||||| || || || ||||||||||| | |||||| || ||||| | ||| | Sbjct 34386 AACAACTTGAGAAAGCTGAAACACATGATGAAATGTGGAATTCAGCACAACTCCAGGCTC 34327 Query 183049 ATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAA 183108 || | ||||| ||||| |||| || | | ||||||||||| ||| || || | || Sbjct 34326 ATCAT-GAAGGTAAAATTCATAATTATATGAGAATGTACTGGTGTAAGAAAATCTTGGAG 34268 Query 183109 TGGACAAGAACTCCGGAAGATGCT-TTGAGTTATAGTATCTATATGAACAATAAGTACGA 183167 |||||| | |||| ||| | || |||| | || | | | |||| ||| | Sbjct 34267 TGGACAGAATCTCCTGAACAAGCCATTGAAT-ATGGGTTATGGCTGAATGATACATTTTG 34209 Query 183168 ACTAGACGGTACGGATCCTAACGGATACGTAGGT 183201 ||||| ||||| |||||||||||||| |||||| Sbjct 34208 TCTAGATGGTACAGATCCTAACGGATATGTAGGT 34175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903135738632480