Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq74 217 1e-51 >seq74 Length=1577532 Score = 217 bits (240), Expect = 1e-51 Identities = 923/1441 (64%), Gaps = 28/1441 (2%) Strand=Plus/Minus Query 146890 TGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAA 146949 || ||||| || || ||||| || | || || | ||| || | ||| ||| || Sbjct 1096422 TGGTTGACAACCTGGAACTCCCCAGAAAGGACCCTCCTGGTGTAGATATTCGAGGTGTAA 1096363 Query 146950 GGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCC 147009 ||||| | ||||| || ||||| | ||||| || || | || ||||||||| || Sbjct 1096362 GGCTCGATGGACTCGTTGTTGCCCAGGATTTGCGCAGTAGACGCAGTAGGCATGGGAGCG 1096303 Query 147010 ACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCC 147069 | ||||| ||||| || | || | | ||| || |||||||||| ||||||| Sbjct 1096302 AGTAACAAGGAATTGCGTACCCCATGCTTGGCGATTTTCTCCTTCAAAGCAGACCAGTCC 1096243 Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 || | | || || ||| ||||||||||||||| | | ||| || | ||| Sbjct 1096242 CAGAGATCTGTCGGAGTAACGCCCCACATGTCGTACTGCAAGATACCTTTGCTTACAGGA 1096183 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||||| || | || | || ||||| || || | ||| || || ||||| || Sbjct 1096182 CTGCCTTCGTAGGTCGAATAAGGGCCGTCTTTCTCGGCTAGTTCGCAACTCGCCTCCAGG 1096123 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 || | ||||| | ||||||| ||||| || || | | | ||| | |||||| ||| Sbjct 1096122 GCCGCGTAGTAGAGGGTTTCGAATATTTGCTTATTCAAAAGTGCCGCCTGTTCGCTATCG 1096063 Query 147250 TAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 | ||||| |||| || | || || || || || |||||||| |||| ||||| || Sbjct 1096062 AAGGGCATGCGCATGAGGATGAACGCGTCCGCTAACCCCTGGATCCCGATTCCGATGGGC 1096003 Query 147310 CGATGCTTTTCGT-TGCTGC-GCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAATA 147366 || || | || | | | | || |||| ||| | |||||| |||| ||| || || Sbjct 1096002 CGGTG--TCTCATATTCGACAGCCTCGC-CTCGGGTATGGGGTAGTAGTTCACGTCGATT 1095946 Query 147367 ATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAA 147426 || |||| | ||| | | || || ||||||||| | | | |||| |||||| || Sbjct 1095945 ATTTTGTCCAAGTTCCTGGCGACCACCTTAGTTATTTCTCTCAACTTCTGGAAATCGTAT 1095886 Query 147427 GTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCC 147486 ||| | ||| ||| | ||| || ||||| || |||| ||||| || || Sbjct 1095885 GTCTCACGATCGGGCTTTACAAACATGTTGACAGCGATGGAGGCCAAGTTGCACACAGCG 1095826 Query 147487 GTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACT 147546 ||| |||| | | | |||| | || || | ||||| |||||||| || || Sbjct 1095825 ACCTCATCGGGGGAGGTATACTCGATAATCTCCGTGCACAAGTTGCTGCTCTTGATCGTG 1095766 Query 147547 CCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 147606 || | ||| ||||| || ||||||| ||||| ||||| ||| |||||||||| || Sbjct 1095765 CCAAGATTCTGCTGGTTACTTTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTATGGAGTA 1095706 Query 147607 CCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTCCTGCGCTCGCACCCG-CTG 147665 || ||||| || || | | || ||| | || ||| | || | | | | ||| Sbjct 1095705 CCAGTCTCTACCTGGGATACAGTGATGGCTTTCCACACGTCACGTGCCGGTAACTGCCTG 1095646 Query 147666 CCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCA 147725 ||| | ||| || ||||| || || || | | ||||||||| ||||| |||| Sbjct 1095645 ACGA-ACTTGCCTTCAGCCTCGTAGCGTTCATAGAGCTTCTCAAACTCCTCGCCCCAGCA 1095587 Query 147726 ATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAAC 147785 ||||| ||| || | ||||||| |||||||| ||||| | |||| || | || Sbjct 1095586 ATCGGAAAGCCCCTTGGAGCGATGCGGGCACATCAGAGACCAAGTACCGTCAGCCTCGAC 1095527 Query 147786 GCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATC----GCGCGCTTTGC 147841 | ||| |||| || || | ||||| ||||| | || || ||||| || Sbjct 1095526 CCTCTTCATGAACAAGTCAGGGATCCACATAGCGTAGAATAGTTCCCTGGCGCGATT--- 1095470 Query 147842 AATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTCGGCGTGCCAG 147900 ||| || || |||| |||| | | | || | | | ||||| || ||||| Sbjct 1095469 AAT-ATCTTTCCCGGTGTTCTTCTTCAGGTCGAGGAACTCCA-AAATGTCCGCATGCCAC 1095412 Query 147901 GGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGCCCTGGTCGACATGGCGC 147957 || || | ||| | || | ||| || | | || || ||||| ||||| | | | Sbjct 1095411 GGCTCTAGGTAAATAGCAAACGCCCCAGGTCTCTTGTTGCCTCCCTGATCGACGTACCTC 1095352 Query 147958 ACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAA 148017 || | ||||| ||||| | || | || | || || | | | || | || Sbjct 1095351 GCCGTATTGTTGAACACCCTCAGTAGAGGGACGAGCCCATTGGATTTTGCGATCCTG--- 1095295 Query 148018 TTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTAC 148077 | |||| | ||| |||||| | | ||||||||| ||||| || || || || || Sbjct 1095294 TCAATCTCGGTGCTCTTGGCTCGTATGTTGTGCACGTTCACGCCGATCCCTCCCGCGGAC 1095235 Query 148078 TTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTG 148137 ||||| || | ||||| | || | || | || || | |||||| || | Sbjct 1095234 TTTGAAATAACGGCGCACCTGGACAGACACTTGCTCACCCCCTCCAAGCTGTC--TTCCG 1095177 Query 148138 ACGCCA--AGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGG 148195 | || ||||| || || ||| ||| ||| || | || | |||||||| | | Sbjct 1095176 GCATCATTAGCAAGAAGCAAGAAGACAGTTGAGGTCGTGGAGTGGCAGCCGAGAACAAAG 1095117 Query 148196 TGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTT 148255 | || || || ||||| || | || | ||||| | || || | |||||| | | Sbjct 1095116 TAGGGCTAGCATGCGTGAAATACTTCTCCGACATCAAGTTGTAAGTGTTAATAGCTGCGT 1095057 Query 148256 CGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGG 148315 | ||||| |||||||| || || | |||||| | ||| | ||||||||| || ||||| | Sbjct 1095056 CTATGTCTTCGCCGTGGATCCCGACCGCGACTCTCATCAACATGTGCTGAGGACGTTCAG 1094997 Query 148316 C 148316 | Sbjct 1094996 C 1094996 Score = 208 bits (230), Expect = 7e-49 Identities = 921/1441 (64%), Gaps = 28/1441 (2%) Strand=Plus/Minus Query 146890 TGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAA 146949 || ||||| || || ||||| || | || || | ||| || | ||| ||| || Sbjct 1093091 TGGTTGACAACCTGGAACTCCCCAGAAAGGACCCTCCTGGTGTAGATATTCGAGGTGTAA 1093032 Query 146950 GGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCC 147009 ||||| | ||||| || ||||| | ||||| || || | || ||||||||| || Sbjct 1093031 GGCTCGATGGACTCGTTGTTGCCCAGGATTTGCGCAGTAGACGCAGTAGGCATGGGAGCG 1092972 Query 147010 ACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCC 147069 | ||||| ||||| || | || | | ||| || |||||||||| ||||||| Sbjct 1092971 AGTAACAAGGAATTGCGTACCCCATGCTTGGCGATTTTCTCCTTCAAAGCAGACCAGTCC 1092912 Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 || | | || || ||| ||||||||||||||| | | ||| || | ||| Sbjct 1092911 CAGAGATCTGTCGGAGTAACGCCCCACATGTCGTACTGCAAGATACCTTTGCTTACAGGA 1092852 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||||| || | || | || ||||| || || | ||| || || ||||| || Sbjct 1092851 CTGCCTTCGTAGGTCGAATAAGGGCCGTCTTTCTCGGCTAGTTCGCAACTCGCCTCCAGG 1092792 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 || | ||||| | ||||||| |||||| || || | | | ||| | |||||| ||| Sbjct 1092791 GCCGCGTAGTAGAGGGTTTCGAAGATTTGCTTATTCAAAAGTGCCGCCTGTTCGCTATCG 1092732 Query 147250 TAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 | ||||| |||| || | || || || || || |||||||| |||| ||||| || Sbjct 1092731 AAGGGCATGCGCATGAGGATGAACGCGTCCGCTAACCCCTGGATCCCGATTCCGATGGGC 1092672 Query 147310 CGATGCTTTTCGT-TGCTGC-GCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAATA 147366 || || | || | | | | || |||| ||| | |||||| |||| ||| || || Sbjct 1092671 CGGTG--TCTCATATTCGACAGCCTCGC-CTCGGGTATGGGGTAGTAGTTCACGTCGATT 1092615 Query 147367 ATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAA 147426 || |||| | ||| | | || || ||||||||| | | | |||| |||||| || Sbjct 1092614 ATTTTGTCCAAGTTCCTGGCGACCACCTTAGTTATTTCTCTCAACTTCTGGAAATCGTAT 1092555 Query 147427 GTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCC 147486 ||| | ||| ||| | ||| || ||||| || |||| ||||| || || Sbjct 1092554 GTCTCACGATCGGGCTTTACAAACATGTTGACAGCGATGGAGGCCAAGTTGCACACAGCG 1092495 Query 147487 GTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACT 147546 ||| |||| | | | |||| | || || | ||||| |||||||| || || Sbjct 1092494 ACCTCATCGGGGGAGGTATACTCGATAATCTCCGTGCACAAGTTGCTGCTCTTGATCGTG 1092435 Query 147547 CCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 147606 || | ||| ||||| || ||||||| ||||| || || ||| |||||||||| || Sbjct 1092434 CCAAGATTCTGCTGGTTACTTTTCCTGTTGCAAGCATCCTTGTAGAGCATGTAAGGAGTA 1092375 Query 147607 CCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTCCTGCGCTCGCACCCG-CTG 147665 || ||||| || || | | || ||| | || ||| | || | | | | ||| Sbjct 1092374 CCAGTCTCTACCTGGGATACAGTGATGGCTTTCCACACGTCACGTGCCGGTAACTGCCTG 1092315 Query 147666 CCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCA 147725 ||| | ||| || ||||| || || || | | ||||||||| ||||| |||| Sbjct 1092314 ACGA-ACTTGCCTTCAGCCTCGTAGCGTTCATAGAGCTTCTCAAACTCCTCGCCCCAGCA 1092256 Query 147726 ATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAAC 147785 | || ||| || | ||||||| |||||||| ||||| | |||| || | || Sbjct 1092255 AATGGAAAGCCCCTTGGAGCGATGCGGGCACATCAGAGACCAAGTACCGTCAGCCTCGAC 1092196 Query 147786 GCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATC----GCGCGCTTTGC 147841 | ||| |||| || || | ||||| ||||| | || || ||||| || Sbjct 1092195 CCTCTTCATGAACAAGTCAGGGATCCACATAGCGTAGAATAGTTCCCTGGCGCGATT--- 1092139 Query 147842 AATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTCGGCGTGCCAG 147900 ||| || || |||| |||| | | | || | | | ||||| || ||||| Sbjct 1092138 AAT-ATCTTTCCCGGTGTTCTTCTTCAGGTCGAGGAACTCCA-AAATGTCCGCATGCCAC 1092081 Query 147901 GGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGCCCTGGTCGACATGGCGC 147957 || || | ||| | || | ||| || | | || || ||||| ||||| | | | Sbjct 1092080 GGCTCTAGGTAAATAGCAAACGCCCCAGGTCTCTTGTTGCCTCCCTGATCGACGTACCTC 1092021 Query 147958 ACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAA 148017 || | ||||| ||||| | || | || | || || | | | || | || Sbjct 1092020 GCCGTATTGTTGAACACCCTCAGTAGAGGGACGAGCCCATTGGATTTTGCGATCCTG--- 1091964 Query 148018 TTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTAC 148077 | |||| | ||| |||||| | | ||||||||| ||||| || || || || || Sbjct 1091963 TCAATCTCGGTGCTCTTGGCTCGTATGTTGTGCACGTTCACGCCGATCCCTCCCGCGGAC 1091904 Query 148078 TTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTG 148137 ||||| || | ||||| | || | || | || || | |||||| || | Sbjct 1091903 TTTGAAATAACGGCGCACCTGGACAGACACTTGCTCACCCCCTCCAAGCTGTC--TTCCG 1091846 Query 148138 ACGCCA--AGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGG 148195 | || ||||| || || ||| ||| ||| || | || | |||||||| | | Sbjct 1091845 GCATCATTAGCAAGAAGCAAGAAGACAGTTGAGGTCGTGGAGTGGCAGCCGAGAACAAAG 1091786 Query 148196 TGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTT 148255 | || || || ||||| || | || | ||||| | || || | |||||| | | Sbjct 1091785 TAGGGCTAGCATGCGTGAAATACTTCTCCGACATCAAGTTGTAAGTGTTAATAGCTGCGT 1091726 Query 148256 CGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGG 148315 | ||||| |||||||| || || | |||||| | ||| | ||||||||| || ||||| | Sbjct 1091725 CTATGTCTTCGCCGTGGATCCCGACCGCGACTCTCATCAACATGTGCTGAGGACGTTCAG 1091666 Query 148316 C 148316 | Sbjct 1091665 C 1091665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476465875287480