Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq318 93.3 3e-14 >seq318 Length=663677 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| ||||| | ||||| |||||||||||| ||||| ||||| | Sbjct 605688 ATGCAGATCTTTGTCAAAACTCTAACTGGAAAGACCATTACCTTGGAAGTGGAACCATCC 605747 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | || ||| |||||| ||||| ||||| | ||| || ||| Sbjct 605748 GACACCATCGAGAATGTAAAAGCCAAAATTCAGGACAAGGAAGGAATTCCCCCAGACCAA 605807 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | || || |||||| | |||||| | ||| || ||||| ||| Sbjct 605808 CAAAGATTGATCTTCGCTGGAAAACAACTGGAAGATGGCAGAACCTTGTCTGATTATAAC 605867 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || |||||||||||||| || || || Sbjct 605868 ATTCAGAAAGAATCTACACTTCACTTGGT 605896 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| ||||| | ||||| ||||| |||||| ||||| ||||| | Sbjct 606144 ATGCAGATCTTTGTCAAAACTCTAACTGGAAAGACAATTACCTTGGAAGTTGAACCATCC 606203 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | |||||| ||||| |||||||| ||| | ||| || ||| Sbjct 606204 GACACCATCGAGAACGTGAAAGCTAAAATCCAAGACAAAGAGGGCATTCCCCCAGACCAA 606263 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | || || |||||| | |||||| ||| || ||||| ||| Sbjct 606264 CAAAGATTGATCTTCGCTGGAAAACAACTGGAAGATGGCCGAACCTTGTCAGATTATAAC 606323 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || ||||||||||| || ||||| || Sbjct 606324 ATTCAGAAAGAATCTACGCTTCATTTGGT 606352 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || ||||| ||||| || ||||| |||||||| || | ||| ||||| Sbjct 605915 AATGCAGATCTTTGTCAAAACTTTAACTGGAAAGACCATAACGTTAGAAGTTGAACCATC 605974 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | | | | |||||| ||||| |||||||| ||| | ||| || || Sbjct 605975 TGACACCATCGAGAACGTGAAAGCTAAAATCCAAGACAAAGAGGGCATTCCCCCAGACCA 606034 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||||| | || | ||| || |||||| | |||||| ||| | ||||| || Sbjct 606035 ACAAAGATTGATCTTTGCTGGAAAACAACTGGAAGATGGCCGAACCTTATCAGATTATAA 606094 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 ||| || |||||||||||||| || || || Sbjct 606095 CATTCAGAAAGAATCTACACTTCACTTGGT 606124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402209991558944