Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq318 109 5e-19 seq253 93.3 4e-14 >seq318 Length=663677 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||| ||||| | ||||||||| | || ||||| || || || ||||| Sbjct 605650 TCTTTTTGAATGTTATAATCTGACAAGGTTCGGCCATCTTCCAGTTGTTTTCCAGCAAAG 605591 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| | || ||||| | |||| | ||||| || |||||| || | | | Sbjct 605590 ATCAATCTTTGTTGGTCTGGGGGAATTCCTTCCTTATCTTGGATCTTGGCTTTAACATTC 605531 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | ||| ||||| | ||||| |||||||| |||| ||||||||| Sbjct 605530 TCGATGGTGTCAGATGGTTCAACCTCAAGGGTGATAGTTTTACCAGTCAGCGTTTTCACA 605471 Query 35726 AATATCTGCATTCTG 35740 || |||||||||||| Sbjct 605470 AAGATCTGCATTCTG 605456 >seq253 Length=804807 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| || ||||| || | ||| || || | || |||| || ||||| ||||| Sbjct 281404 TCCTTTTGTATATTGTAGTCCGACAAAGTACGTCCATCTTCCAATTGTTTACCAGCAAAA 281463 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || ||||| || || | |||| | |||||||| ||||| ||| | | || Sbjct 281464 ATTAAACGCTGTTGATCTGGTGGAATTCCCTCCTTGTTTTGAATCTTAGCCTTAACATTT 281523 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || | ||| ||||| | ||||| || ||||| ||||||||||| ||| Sbjct 281524 TCGATGGTATCCGAAGGTTCGACCTCAAGAGTGATGGTCTTACCAGTCAAAGTTTTAACA 281583 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 281584 AAGATCTGCAT 281594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450656147396440