Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq74 96.9 4e-15 >seq74 Length=1577532 Score = 96.9 bits (106), Expect = 4e-15 Identities = 262/392 (67%), Gaps = 12/392 (3%) Strand=Plus/Plus Query 104699 GATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGC 104758 || || |||| |||| | ||||| || || | ||||||||||| || |||| || Sbjct 1095482 GAACTATTCTACGCTATGTGGATCCCTGACTTGTTCATGAAGAGGGTCGAGGCTGACGGT 1095541 Query 104759 AATTGGTCTCTCTTTTGTCCAGACAAGGCACCT--GGTCTCTCCGATGCCGTGGGTGAGG 104816 | ||||||||| | || || || || || || || |||||| | ||| |||| Sbjct 1095542 ACTTGGTCTCTGATGTGCCCG--CATCGCTCCAAGGGGCTTTCCGATTGCTGGGGCGAGG 1095599 Query 104817 AGTTTGA--AGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGG-CGACTGCGACGGTGC 104873 ||||||| ||| || | || ||||||| ||||| | || | | | | | | Sbjct 1095600 AGTTTGAGAAGCTCTATGAACGC--TACGAGGCTGAAGGCAAGTTCGTCAGGCA-GTTAC 1095656 Query 104874 CAGCTGCCGATGTGTGGAAAGCTATT-CTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 | || || ||||||||||| || || | || || ||||||||||| |||||| Sbjct 1095657 CGGCACGTGACGTGTGGAAAGCCATCACTGTA-TCCCAGGTAGAGACTGGTACTCCATAC 1095715 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992 ||||| ||||| ||||| || ||| || ||||| || ||||| | || ||||||| Sbjct 1095716 ATGCTCTACAAGGACGCTTGCAACAGGAAAAGTAACCAGCAGAATCTTGGCACGATCAAG 1095775 Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052 || ||| | || || || || | || | ||| | |||||| |||||||| Sbjct 1095776 AGCAGCAACTTGTGCACGGAGATTATCGAGTATACCTCCCCCGATGAGGTCGCTGTGTGC 1095835 Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGT 105084 ||| | || || |||||| || || || ||| Sbjct 1095836 AACTTGGCCTCCATCGCTGTCAACATGTTTGT 1095867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583082956491320