Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq74 134 2e-26 >seq74 Length=1577532 Score = 134 bits (148), Expect = 2e-26 Identities = 896/1413 (63%), Gaps = 53/1413 (4%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 |||| ||| |||||||| || |||||||||||||| ||||| || || | |||||| Sbjct 1093397 GTTCTCAAGTAGTACATCCCAGTCTTGAGACCCTTTTTCCACCCATAGAAGTGCATCGAA 1093338 Query 78250 GACAGCTTGGCCAGAC-TCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 |||||| || || | | |||||||| ||| || | |||| ||| ||||| Sbjct 1093337 GACAGC-GCTCCGTACGTAGCTTTCTCCATATGGATATTCAAGCTCTGGCTCTGATCGAT 1093279 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368 | | || || | || |||||||||| ||| | ||| |||| ||||||||| | ||| Sbjct 1093278 GAAGGCCCCTCTATCCGCCGCCATGTTGATAATAACCTTCTGCGAAATCTCCCACACGGT 1093219 Query 78369 CCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCT-TGTACGCTCCCACCG--GC 78425 | |||||| || || || | ||| | ||| || | | | | | | | ||| | Sbjct 1093218 CTTGTAAATAGCTTTGAGGTTATCCGGAATG-CCGGGGATGTTTTGGATAGACCCGAAGT 1093160 Query 78426 TCGC-ACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTG-AAGATCCCGG 78483 | || | | || ||||| || | || ||| | | | || | ||||| | Sbjct 1093159 TGGCGAGGACTTGGTTCTTCATGGTATCGTCCCA-CAAGGAGGCATCCGTTAGATCATTG 1093101 Query 78484 ACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTG 78543 | |||||| |||| | | |||||| || | ||| || | |||||| || Sbjct 1093100 ATCAGGTGTTGGTTGACAACCTGGAACTCCCCAGAAAGGACCCTCCTGGTGTAGATATTC 1093041 Query 78544 GTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGC 78603 | ||||| ||||||| | ||||||||| |||| ||| || || || || || || ||| Sbjct 1093040 GAGGTGTAAGGCTCGATGGACTCGTTGTTGCCCAGGATTTGCGCAGTAGACGCAGTAGGC 1092981 Query 78604 ATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT-----TA 78658 ||||| |||| | | ||||| || | |||||| | ||| | |||| | Sbjct 1092980 ATGGGAGCGAGTAACAAGGAATTGCGTACCCCATGCTTGGCGATTTTCTCCTTCAAAGCA 1092921 Query 78659 GGCC-GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCG 78717 | || |||||| | || ||| | | ||||||||||| || | |||||| | | Sbjct 1092920 GACCAGTCCCAGAGATCTGTCGGAGTAACGCCCCACATGTCGTACTGCAAGATACCTTTG 1092861 Query 78718 GACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGAC 78777 | || || | | | ||| |||| || || | || ||| |||||||| || Sbjct 1092860 CTTACAGGACTGCCTTCGTAGGTCGAATAAGGGCCGTCTTTCTCGGCTAGTTCGCA--AC 1092803 Query 78778 TCG--AGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCT 78835 ||| ||||||||||| ||| | | |||||||| ||| || | ||||| Sbjct 1092802 TCGCCTCCAGGGCCGCGTAGTAGAGGGTTTCGAAGATTTGCTTATTCAAAAGTGCCGCCT 1092743 Query 78836 TGGTCTCGTCGAACGAAAGGC-CGAGCAT---CATGAAGACATCGGCCAGGCCCTGGACG 78891 || ||| | | |||| ||| | |||| ||||| | || || | ||||||| Sbjct 1092742 --GT-TCG-CTATCGAAGGGCATGCGCATGAGGATGAACGCGTCCGCTAACCCCTGGATC 1092687 Query 78892 CCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGG---TCGGGTAA 78948 ||||| |||| || ||||| | ||| | || | |||||||| | ||||| Sbjct 1092686 CCGATTCCGATGGGCCGGTGTCTCATAT---TCGACAGCCTCGCCTCGGGTATGGGGTAG 1092630 Query 78949 AAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAAT 79008 ||||| ||||| | || || ||| | | ||| ||| ||| | || ||| Sbjct 1092629 TAGTTCACGTCGATTATTTTGTCCAAGTTCCTGGCGACCACCTTAGTTATTTCTCTCAAC 1092570 Query 79009 TTGGCGAAATCAAA------ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGAT--- 79059 || |||||| | | ||| || | || | || | |||||||| Sbjct 1092569 TTCTGGAAATCGTATGTCTCACGATCGGGCTTTACAAACAT--GTTG--ACAGCGATGGA 1092514 Query 79060 -GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAA 79118 |||| ||||||||| || ||| || ||| | | |||||| || || |||||||| Sbjct 1092513 GGCCAAGTTGCACACAGCGACCTCATCGGGGGAGGTATACTCGATAATCTCCGTGCACAA 1092454 Query 79119 ATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTT 79178 || |||||| ||||| | |||| |||||| || ||| ||| || || ||||| Sbjct 1092453 GTTGCTGCTCTTGATCGTGCCAAGATTCTGCTGGTTACTTTTCCTGTTGCAAGCATCCTT 1092394 Query 79179 GTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAG-AACGCCGTCCCAGATGT 79237 |||| |||||| || || || ||||| ||||| | || | | | | ||| | || Sbjct 1092393 GTAGAGCATGTAAGGAGTACCAGTCTCTACCTG-GGATACAGTGATGGCTTTCCACACGT 1092335 Query 79238 CCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTA-CGTCCGGTACAACTCG 79296 | || ||| | | | | | || || | || |||| ||| | || | || Sbjct 1092334 CACGTGCCGGTAACTGCCTGACGAACTTGCCTTCAGCCTCGTAGCGTTC-ATAGAGCTTC 1092276 Query 79297 TTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAG-GTG 79355 | || |||| || || | || || ||| | | |||||||||||||| | Sbjct 1092275 TCAAACTCCTCGCCCCAGCAAATGGAAAGCCCCTTGGAGCGATGCGGGCACATCAGAGAC 1092216 Query 79356 CCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAA 79415 | ||| | |||| ||| ||| ||| |||||| | ||| |||||||||| || ||| Sbjct 1092215 CAAGTAC-CGTCAGCCTCGACCCTCTTCATGAACAAGTCAGGGATCCACATAGCGTAGAA 1092157 Query 79416 GAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCAT 79475 || || | | || | || | || |||| ||| ||||| || |||| Sbjct 1092156 TAGTTCCCTGGCGCGATTAATATCTTTCCCGGTGTTCTTCTTCAGGTCGAGGAACTCCAA 1092097 Query 79476 GATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCC 79535 ||||| || ||||||||||| || || || || |||| || | |||| ||| || Sbjct 1092096 AATGTCCGCATGCCACGGCTCTAGGTAAATAGCAAACGCCCCAGGTCTCTTGTTGCCTCC 1092037 Query 79536 CTGGTTGACGTACCGGGCCGTGTTGTTGAAAAC 79568 ||| | |||||||| ||||| |||||||| || Sbjct 1092036 CTGATCGACGTACCTCGCCGTATTGTTGAACAC 1092004 Score = 118 bits (130), Expect = 1e-21 Identities = 676/1063 (64%), Gaps = 44/1063 (4%) Strand=Plus/Minus Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593 |||||| || | ||||| ||||||| | ||||||||| |||| ||| || || || || Sbjct 1096381 GTAGATATTCGAGGTGTAAGGCTCGATGGACTCGTTGTTGCCCAGGATTTGCGCAGTAGA 1096322 Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653 || || |||||||| |||| | | ||||| || | |||||| | ||| | | Sbjct 1096321 CGCAGTAGGCATGGGAGCGAGTAACAAGGAATTGCGTACCCCATGCTTGGCGATTTTCTC 1096262 Query 78654 CTTTA-----GGCC-GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707 ||| | | || |||||| | || ||| | | ||||||||||| || | Sbjct 1096261 CTTCAAAGCAGACCAGTCCCAGAGATCTGTCGGAGTAACGCCCCACATGTCGTACTGCAA 1096202 Query 78708 GATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAG 78767 |||||| | | | || || | | | ||| |||| || || | || ||| || Sbjct 1096201 GATACCTTTGCTTACAGGACTGCCTTCGTAGGTCGAATAAGGGCCGTCTTTCTCGGCTAG 1096142 Query 78768 TTCGCATGACTCGAG--CAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGC 78825 |||||| ||||| ||||||||||| ||| | | ||||| || ||| || | Sbjct 1096141 TTCGCA--ACTCGCCTCCAGGGCCGCGTAGTAGAGGGTTTCGAATATTTGCTTATTCAAA 1096084 Query 78826 TCGCGCGCCTTGGTCTCGTCGAACGAAAGGCC-GAGCATCATGAAGA---CATCGGCCAG 78881 ||||| || ||| | | |||| ||| | |||| | || || | || || | Sbjct 1096083 AGTGCCGCCT--GT-TCG-CTATCGAAGGGCATGCGCATGAGGATGAACGCGTCCGCTAA 1096028 Query 78882 GCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGG- 78940 ||||||| ||||| |||| || ||||| | ||| || | | |||||||| Sbjct 1096027 CCCCTGGATCCCGATTCCGATGGGCCGGTGTCTCATATTCGACAGCCT---CGCCTCGGG 1095971 Query 78941 --TCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCAC 78998 | ||||| ||||| ||||| | || || ||| | | ||| ||| ||| | Sbjct 1095970 TATGGGGTAGTAGTTCACGTCGATTATTTTGTCCAAGTTCCTGGCGACCACCTTAGTTAT 1095911 Query 78999 CTCGTACAATTTGGCGAAATCAAA------ATGATTTCCTTTGATGAAAGTCGGTAGGCA 79052 || ||| || |||||| | | ||| || | || | || | | Sbjct 1095910 TTCTCTCAACTTCTGGAAATCGTATGTCTCACGATCGGGCTTTACAAACAT--GTTG--A 1095855 Query 79053 CAGCGATG----CCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTT 79108 |||||||| ||| ||||||||| || ||| || ||| | | |||||| || | Sbjct 1095854 CAGCGATGGAGGCCAAGTTGCACACAGCGACCTCATCGGGGGAGGTATACTCGATAATCT 1095795 Query 79109 CTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTAC 79168 | |||||||| || |||||| ||||| | |||| |||||| || ||| ||| | Sbjct 1095794 CCGTGCACAAGTTGCTGCTCTTGATCGTGCCAAGATTCTGCTGGTTACTTTTCCTGTTGC 1095735 Query 79169 AGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAG-AACGCCG 79227 | |||||||||||| |||||| || || || ||||| ||||| | || | | | Sbjct 1095734 AAGCGTCCTTGTAGAGCATGTATGGAGTACCAGTCTCTACCTG-GGATACAGTGATGGCT 1095676 Query 79228 TCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTA-CGTCCG 79286 | ||| | ||| || ||| | | | | | || || | || |||| ||| | Sbjct 1095675 TTCCACACGTCACGTGCCGGTAACTGCCTGACGAACTTGCCTTCAGCCTCGTAGCGTTC- 1095617 Query 79287 GTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCA 79346 || | || | || |||| || || ||||| || ||| | | |||||||| Sbjct 1095616 ATAGAGCTTCTCAAACTCCTCGCCCCAGCAATCGGAAAGCCCCTTGGAGCGATGCGGGCA 1095557 Query 79347 CATCAG-GTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACA 79405 |||||| | | ||| | |||| ||| ||| ||| |||||| | ||| |||||||||| Sbjct 1095556 CATCAGAGACCAAGTAC-CGTCAGCCTCGACCCTCTTCATGAACAAGTCAGGGATCCACA 1095498 Query 79406 GGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGA 79465 || ||| || || | | || | || | || |||| ||| |||| Sbjct 1095497 TAGCGTAGAATAGTTCCCTGGCGCGATTAATATCTTTCCCGGTGTTCTTCTTCAGGTCGA 1095438 Query 79466 GAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCT 79525 | || |||| ||||| || ||||||||||| || || || || |||| || | || Sbjct 1095437 GGAACTCCAAAATGTCCGCATGCCACGGCTCTAGGTAAATAGCAAACGCCCCAGGTCTCT 1095378 Query 79526 TGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAAC 79568 || ||| ||||| | |||||||| ||||| |||||||| || Sbjct 1095377 TGTTGCCTCCCTGATCGACGTACCTCGCCGTATTGTTGAACAC 1095335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548357547931920