Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq318 82.4 5e-11 >seq318 Length=663677 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 |||| ||| || ||| || ||||| ||||| ||||| | | || | || | || || Sbjct 605668 ACCAAGTGGAGTGTGGATTCTTTTTGAATGTTATAATCTGACAAGGTTCGGC-CATCTTC 605610 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||| || || || ||||||||||| | || || |||| || | |||||||| || Sbjct 605609 CAGTTGTTTTCCAGCAAAGATCAATCTTTGTTGGTCTGGGGGAATTCCTTCCTTATCTTG 605550 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| |||| || ||| | |||||||| | | ||| ||||| | || || || | Sbjct 605549 GATCTT-GGCTTTAACATTCTCGATGGTGTCAGATGGTTCAACCTCAAGGGTGATAGTTT 605491 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || || ||||| ||||| ||||| Sbjct 605490 TACCAGTCAGCGTTTTCACAAAGATCTGCAT 605460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359883378566481