Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq318 82.4 7e-11 >seq318 Length=663677 Score = 82.4 bits (90), Expect = 7e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||| ||| ||||| || |||||||||||||| || || | ||| || Sbjct 606361 AGACGAAGAACCAAATGAAGCGTAGATTCTTTCTGAATGTTATAATCTGACAAGGTTCGG 606302 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || || || || || ||||| |||| | |||||||| | ||||| || ||| Sbjct 606301 CCATCTTCCAGTTGTTTTCCAGCGAAGATCAATCTTTGTTGGTCTGGGGGAATGCCCTCT 606242 Query 41765 TTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||| | || |||| |||| ||| | | |||||| | || || |||| || Sbjct 606241 TTGT-CTTGGATTTTAGCTTTCACGTTCTCGATGGTGTCGGATGGTTCAACTTCCAAGGT 606183 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || || || || || |||||||| Sbjct 606182 AATTGTCTTTCCAGTTAGAGTTTTGACAAAGATCTGCAT 606144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462163037731600