Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq17032 105 7e-18 seq29084 100 3e-16 >seq17032 Length=5332 Score = 105 bits (116), Expect = 7e-18 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 16459 CTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTC 16518 || |||||| | || || || || ||||||| | |||||||| || || | ||| || Sbjct 409 CTTAATATCACTAATGTAAGTGTCGATCAGTAGAGAATACATTTCAGAATGAACGTTTTC 468 Query 16519 TATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAA 16578 ||||| | |||||||||||||| || |||||||| | | ||| ||||| | ||| Sbjct 469 CATGGCCACTTGAAATCCATAGAAACAACGAGCCTCTGTCACTTGAACTTCTTGGCTAAA 528 Query 16579 TCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGC--CAATATG 16636 |||||| ||| || || || || |||||||| |||||| ||||| || |||||| Sbjct 529 GCGTTCCACCAAATTTTCGTTAACAATACCGTCGGATGCAGCGAAAAAGGCTAAAATATG 588 Query 16637 TG 16638 || Sbjct 589 TG 590 >seq29084 Length=6691 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 16027 AACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT 16086 || || ||| || || |||||||| || || || ||||| || | |||||| || || || Sbjct 767 AAGTAGTCTGTCGGCAACAAATTCAATGTACTGGCACATCAATTTGCAATTCATGCCGAT 708 Query 16087 AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAAT 16146 | | || || | ||| | |||||||| | |||||| || || || |||||||| Sbjct 707 CATTTCCACAGGCAAAGCGTCAGTTAAAAACTCTTGTTCAATAGACACTGCGTCTTTAAT 648 Query 16147 GATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGC 16206 || | ||||| || ||| ||| | || | |||||||||||| |||||||| Sbjct 647 TATTGAAATCACTCGTTCTTTAGATGGTTTTTGAACGATGTGTTTAAACATCAGACACGC 588 Query 16207 GAAGTCGCAATGTAGTCC 16224 |||||| || |||||||| Sbjct 587 GAAGTCACAGTGTAGTCC 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511180427912000