Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq33810 235 7e-57 seq29084 100 3e-16 seq17032 98.7 1e-15 >seq33810 Length=88678 Score = 235 bits (260), Expect = 7e-57 Identities = 392/561 (70%), Gaps = 14/561 (2%) Strand=Plus/Minus Query 53550 TACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAA 53609 ||||||| ||||| ||||| ||| || | |||||||| || || || || ||||| Sbjct 66806 TACCGATTGGTCTGTGTCTGAAATTGGATTTCTCAGCTTCGGGTATTGGGTAGAAATTAT 66747 Query 53610 TATCTATAATTTTATTGAGGTTTCTG---ACAATTACTTTGACCACATCCTTCAG-TTTG 53665 | || |||||||||| | |||||| |||||| | | | | || ||||| |||| Sbjct 66746 TGTCAATAATTTTATCTAAGTTTCTAGTAACAATTTTTGTTATC---TCTTTCAGCTTTG 66690 Query 53666 AGAAAATCAAA-----TTGTCCATCTATT-ACAAACATGTTCAATGCAATAGATGCCAGA 53719 | ||| ||||| | || | ||| || |||||||| | ||||| || |||| | Sbjct 66689 A-AAAGTCAAAAGTTTTAGTACTGGAATTGACGAACATGTTAACAGCAATTGAAGCCAAA 66631 Query 53720 TTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 53779 || |||||||| || |||| | | | |||||| || || |||||||| |||||||| Sbjct 66630 TTGCAAACGGCCACTTCATCTGGACTAGAATATTGAATAATTTCAGTGCAGAGATTACTG 66571 Query 53780 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 53839 || || || ||||| | |||||||||||| ||| | || || ||| || || || Sbjct 66570 CATTTTATAGTTCCAATATTTTGTTGATTTGATTTTCTATTGCAGTGATCTTTGTACAGC 66511 Query 53840 ATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCC 53899 ||| | || || || ||||||| || || | ||| || |||| | | |||| || Sbjct 66510 ATGTAAGGGGTCCCGGTTTCAACTTGTGAAATCAAAATTGCAGTCCATAGGTCACGCGCT 66451 Query 53900 TTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCG 53959 || ||| | |||| || | ||| |||||||| |||||| | ||||| || Sbjct 66450 TTAATTTGACGTTTGAATTTGCCTTCCGTTTCGTATTTTGTATAGAGAACATCAAATTCT 66391 Query 53960 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 54019 ||||||||||||| | | || ||| |||| | |||||||| || | |||| |||| Sbjct 66390 TCTCCCCAAACATCAGCAAGACCTGGAGATTCGTGAGGACACATTAAGGTCCACATTCCG 66331 Query 54020 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 54079 || ||| | || ||||||||||| | ||| |||||||||||| | ||||| || || Sbjct 66330 TCGTCCATTACACGTTTCATAAATAAATCCGGAATCCAAAGACCATAAAATAATTCCCTC 66271 Query 54080 GTTCTATGTTCCTCGTTTCCT 54100 | | || |||||| |||||| Sbjct 66270 GCGCGATATTCCTCTTTTCCT 66250 Score = 140 bits (154), Expect = 4e-28 Identities = 181/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 53078 ATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGA 53137 ||||| ||| || || || || | ||| | ||||| || |||||| || | | ||| Sbjct 67434 ATAATTTCATTTTTCATATCTTCGTCCCACAGATTTCTTTCAGTTAAATCTTTCAAAAGA 67375 Query 53138 TGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTA 53197 || || ||||| | |||||||||||| || | || | | | ||||||||||| || Sbjct 67374 TGAGGGTTAACAATTTGAAATTCTCCCGAGAGAACGCGTCTTGAATAAATATTACTTGTG 67315 Query 53198 TACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGT 53257 |||||||| | || ||||| || ||||||||||| |||||||| || || ||||| || Sbjct 67314 TACGGTTCAATTGATTCATTGTTGCCCAAAATTTGTGCAGTTGAAGCTGTTGGCATTGGA 67255 Query 53258 GCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAA 53317 || | |||||| ||| | || || | ||| |||||| | |||| || || |||| Sbjct 67254 GCTAACAATAACGAATTACGAACTCCATGAGTTGCGATTTTTGCCTTTAAAGCTTGCCAA 67195 Query 53318 TTCCAAAGAT 53327 | |||||||| Sbjct 67194 TCCCAAAGAT 67185 Score = 107 bits (118), Expect = 2e-18 Identities = 194/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || ||||| || || | |||||| || | | ||| |||| |||||| ||||| | || Sbjct 66170 CCAGTATTTTTCTTTAAATCGAGAAATTCGAAAATGTCAGCATGCCATGGTTCAATATAA 66111 Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217 || | | |||| || | ||||||||| || ||||| | ||||| |||||| ||||| Sbjct 66110 ATTGCAAATGCTCCCGGTCTTTTGTTTCCACCTTGATCAACGTATCGAGCGGTACTATTA 66051 Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277 |||||||| | ||| |||| || |||||||||| | || | || || | ||| || Sbjct 66050 TAAACTCTAATCATAGGAACAAGACCATTGGATTCTCCTTGAGTTCCTGCGATGCGAGTT 65991 Query 54278 CCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAAT 54337 || |||| | ||| | || | || || || || || |||| || | | Sbjct 65990 CCTTTGGCTCTGATACAATGAACGTTAACGCCAATTCCACCAGCGGATTTACTAATGAGT 65931 Query 54338 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 54381 || ||| |||||| || || || ||||| || ||||| || || Sbjct 65930 GCACATTTTTTTAATGTGTCGTATATGCCTTCAATACTGTCTTC 65887 >seq29084 Length=6691 Score = 100 bits (110), Expect = 3e-16 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23933 ATAGATTCTTTT--AAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATAT 23990 |||| | ||||| | ||||||| ||| || | ||| || || ||||| || || || Sbjct 796 ATAGTTACTTTTGGACATCCCAACTCAAGAAGTAGTCTGTCGGCAACAAATTCAATGTAC 737 Query 23991 GTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT 24050 ||||| || |||||||| || || | || || || | ||| |||| | ||| Sbjct 736 TGGCACATCAATTTGCAATTCATGCCGATCATTTCCACAGGCAAAGCGTCAGTTAAAAAC 677 Query 24051 TCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGA 24110 |||||||||||||| || |||||| | || || || | ||| ||||| | ||| Sbjct 676 TCTTGTTCAATAGACACTGCGTCTTTAATTATTGAAATCACTCGTTCTTTAGATGGTTTT 617 Query 24111 TACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 24159 | | | ||||||||||||| ||| ||||| || |||||||| |||| Sbjct 616 TGAACGATGTGTTTAAACATCAGACACGCGAAGTCACAGTGTAGTCCCT 568 >seq17032 Length=5332 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680 || |||| ||| |||||||| || ||||||||||| |||||||| ||||||||||| | | Sbjct 870 TTGGATAAATCAACTTCTTCAACAGTCCAAAATGAAGCCTCTGCTTTTTTATACATCTGC 929 Query 24681 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATT 24740 || || || | ||||||| ||||| | |||||||| | ||||||| | || | Sbjct 930 CAAATATCTGGCCATTGAATGGGAAATACAACAAATCGACGAGGATTTTCTTTGAGAAGA 989 Query 24741 GGTTCCA 24747 ||||||| Sbjct 990 GGTTCCA 996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593449972368000