Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq63 111 1e-19 >seq63 Length=129227 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | ||||| || || || ||||| || ||| ||| ||| | | Sbjct 64355 ATGCAAATTTTCGTTAAAACTTTTACTGGTAAAACTATCACCTTGGAAGTTGAAGCTTCT 64414 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||| |||||| || ||||| || | || ||||||| Sbjct 64415 GACACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAAGAGGGAATCCCACCAGATCAA 64474 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 |||||| | |||||||| || ||||||||||| ||| || || |||| ||||||| | Sbjct 64475 CAAAGATTGATCTTTGCCGGTAAACAACTGGAGGATGGTCGAACGCTAT--CCGATTATA 64532 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||| || ||||| |||||||| |||| ||| || | ||||| || Sbjct 64533 ATATTCAAAAAGAATCCACTCTTCATTTGGTTTTAAGACTTCGAGGCGG 64581 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28956 GTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAA 29015 ||||| ||||| || || | ||||| |||||||| || || |||||| || || Sbjct 61783 GTAAACATGCAGATTTTTGTAAAAACTTTGACGGGGAAGACGATTACCCTTGAGGTTGAG 61842 Query 29016 CCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTA 29075 | | || ||| | | || |||| |||||| ||||||||||| | || | Sbjct 61843 GCTTCTGACACGATCGAGAATGTTAAAGCAAAAATCCAAGATAAAGAAGGAATCCCACCA 61902 Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 |||||||| || | |||||||| || || |||||||||||| ||| || | ||| Sbjct 61903 GATCAACAGCGATTGATCTTTGCTGGAAAGCAACTGGAAGATGGACGAACATTGTCTGAT 61962 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||||||||||| |||||||| || || || |||| Sbjct 61963 TACAATATTCAAAAGGAATCAACACTCCATTTGGT 61997 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| ||| | ||||| ||||| || ||||| || ||| ||| ||| | | Sbjct 63214 AATGCAAATTTTCGTAAAAACCTTGACTGGTAAAACTATCACCTTGGAAGTTGAAGCTTC 63273 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | | ||||| |||||| || ||||| || | || |||||| Sbjct 63274 TGACACCATCGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGAATCCCACCAGATCA 63333 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||||||| | || ||||| || || ||||| |||||| ||| || ||||||| || Sbjct 63334 ACAAAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGACGTACTTTGTCCGATTATAA 63393 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGT 29170 |||||| |||||||| || ||||| |||| Sbjct 63394 TATTCAAAAGGAATCAACACTTCATTTGGT 63423 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| ||| ||||||| || || || ||||||||||| ||| ||| | | Sbjct 63898 AATGCAAATTTTCGTCAAAACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAAGCTTC 63957 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || | || ||||||| || ||||| || | || |||||| Sbjct 63958 CGACACCATTGAGAATGTAAAAGCAAAAATTCAGGACAAAGAGGGAATTCCACCAGATCA 64017 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 |||||| | ||||| || || |||||| | |||||| || || | |||||||| Sbjct 64018 GCAAAGATTGATCTTCGCCGGTAAACAATTAGAAGATGGTCGCACCTTGTCTGATTACAA 64077 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||| || || ||||| ||||||||| |||| | || | ||||| || Sbjct 64078 TATCCAAAAAGAATCCACTCTTCACTTGGTTCTCCGTCTTCGAGGTGG 64125 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | ||||| || || |||||||||||||| ||| ||| | | Sbjct 63671 ATGCAGATTTTCGTTAAAACTTTAACTGGCAAAACCATTACTCTTGAAGTTGAAGCTTCC 63730 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || |||||| || ||||| || | || |||||| Sbjct 63731 GACACCATTGAGAATGTAAAAGCGAAAATTCAAGACAAAGAGGGAATACCACCAGATCAG 63790 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | ||||| || ||||||||| |||||||| || | ||||||||||| Sbjct 63791 CAAAGATTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACGCTTTCCGATTACAAT 63850 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || || ||||| ||||||||| |||| | || | ||||| || Sbjct 63851 ATCCAAAAAGAATCCACTCTTCACTTGGTTCTCCGTCTTCGAGGTGG 63897 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| ||| ||||||| || || || ||||||||||| ||| ||| | | Sbjct 64126 AATGCAAATTTTCGTCAAAACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAAGCTTC 64185 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || | || ||||||| || ||||| || | || |||||| Sbjct 64186 CGACACCATTGAGAATGTAAAAGCAAAAATTCAGGACAAAGAGGGAATTCCACCAGATCA 64245 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 |||||| | ||||| || || |||||| | |||||| || || | ||||| || Sbjct 64246 GCAAAGATTGATCTTCGCCGGTAAACAATTAGAAGATGGTCGCACCTTGTCTGATTATAA 64305 Query 29141 TATTCAGAAGGAATCTAC 29158 ||||||||| |||||||| Sbjct 64306 TATTCAGAAAGAATCTAC 64323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428144935373000