Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq23413 105 5e-18 seq63 98.7 8e-16 seq29408 82.4 6e-11 >seq23413 Length=131177 Score = 105 bits (116), Expect = 5e-18 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCGT 45185 ||||| || || || ||| |||||||| ||||||||| || ||| || |||| | Sbjct 117950 ACCAAATGAAGGGTCGACTCTTTCTGAATATTGTAGTCGGACAAAGTT--CGTCCGTCCT 118007 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 ||| ||||||||| ||||| ||||| ||||| || || ||||| | |||||||||||| Sbjct 118008 CCAATTGTTTTCCAGCGAAGATCAAACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCCT 118067 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 |||||| || || | | | | || | || ||||| | |||||||| | Sbjct 118068 GGATTTTTGCTTTCACGTTCTCGATCGTATCGGAGGCTTCAACCTCTAATGTAATCGTTT 118127 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || ||||| ||||| || |||||||| Sbjct 118128 TTCCAGTGAGAGTTTTCACGAAAATTTGCAT 118158 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCG--TTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCG 45202 ||| ||||| || || |||||| | |||| | | || |||| || ||||||||| Sbjct 118195 CTCTTTCTGGATATTATAGTCGGATAAAGTT--CTTCCATCCTCCAACTGCTTTCCGGCG 118252 Query 45203 AATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACC 45262 || ||||| ||||| || || ||||| | |||||||||||| |||||| || || Sbjct 118253 AAGATCAAACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGGATTTTTGCTTTCACG 118312 Query 45263 GCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTC 45322 | | | |||| |||| || |||| ||| |||||||| || || ||||| ||| Sbjct 118313 TTCTCGATCGTGTCGGAGGCCTCAACTTCCAAGGTGATCGTCTTCCCGGTGAGAGTTTTC 118372 Query 45323 ACAAAGATTTGCAT 45336 || || |||||||| Sbjct 118373 ACGAAAATTTGCAT 118386 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGAT--CGTCGTCCAGTTGTTTTCCGGCG 45202 |||||||||||| || ||||| | || || | | || |||| || ||||||||| Sbjct 117739 CTCCTTCTGAATATTATAGTC--TGAGAGGGTTCTTCCATCCTCCAACTGCTTTCCGGCG 117796 Query 45203 AATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACC 45262 || ||||| ||||| ||||| ||||| | |||||||||||| |||||| ||| || Sbjct 117797 AAGATCAAACGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGGATTTTTGCCTTCACG 117856 Query 45263 GCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTC 45322 | | | |||| ||||||| |||| || || || || || || || || || Sbjct 117857 TTCTCGATCGTGTCAGAGGCCTCCACTTCCAATGTGATTGTTTTTCCAGTAAGGGTTTTT 117916 Query 45323 ACAAAGATTTGCAT 45336 || || |||||||| Sbjct 117917 ACGAAAATTTGCAT 117930 >seq63 Length=129227 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || ||||| ||||| ||||| || || | || | || ||| Sbjct 61997 ACCAAATGGAGTGTTGATTCCTTTTGAATATTGTAATCAGACAATGTTCGTCCATCTTCC 61938 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||| || || ||||| |||||||| || || || | || || || || Sbjct 61937 AGTTGCTTTCCAGCAAAGATCAATCGCTGTTGATCTGGTGGGATTCCTTCTTTATCTTGG 61878 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 |||||| ||||| | | | |||| | |||| ||||| | |||||||||||| Sbjct 61877 ATTTTTGCTTTAACATTCTCGATCGTGTCAGAAGCCTCAACCTCAAGGGTAATCGTCTTC 61818 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||||||| ||| || ||||| || |||||||| Sbjct 61817 CCCGTCAAAGTTTTTACAAAAATCTGCATGTT 61786 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||| | |||||| ||||| || || ||| || || ||||| || || ||| Sbjct 64581 CCGCCTCGAAGTCTTAAAACCAAATGAAGAGTGGATTCTTTTTGAATATTATAATCGGAT 64522 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||||||||| ||||| || ||||| | ||||| || || || Sbjct 64521 AGCGTTCGACCATCCTCCAGTTGTTTACCGGCAAAGATCAATCTTTGTTGATCTGGTGGG 64462 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| ||||| |||||| ||| || | | | | |||| | | || || Sbjct 64461 ATTCCCTCTTTGTCTTGAATTTTAGCCTTGACGTTCTCGATGGTGTCAGAAGCTTCAACT 64402 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || || || || || | ||| || || || |||||||| Sbjct 64401 TCCAAGGTGATAGTTTTACCAGTAAAAGTTTTAACGAAAATTTGCAT 64355 >seq29408 Length=266871 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 13254 GCGGATGCCGGTTTCTTCTACACTGGCTACGGTGACAATACAAAGTGCTTCTATTGTGAC 13313 |||||||| ||||| | ||||| || | ||||| | ||| |||| |||||| Sbjct 78665 GCGGATGCTGGTTTTTATTACACGGGAAAAGGTGATCAGACACTTTGCTATCATTGTGGT 78606 Query 13314 GGCGGATTGAAAGATTGGGAGCCGGAAGATGTACCTTGGGAACAGCATGTAAGATGGTTC 13373 || || ||||| ||||||||| | || |||| ||||||||||| |||| || ||||||| Sbjct 78605 GGTGGTTTGAAGGATTGGGAGGCAGAGGATGATCCTTGGGAACAACATGCAAAATGGTTC 78546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394898971768600