Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq63 109 4e-19 >seq63 Length=129227 Score = 109 bits (120), Expect = 4e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | ||| |||| || ||||||||||| |||||||| ||||| || | Sbjct 62016 TCCACCACGAAGACGAAGGACCAAATGGAGTGTTGATTCCTTTTGAATATTGTAATCAGA 61957 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || |||| | |||||||| ||| || || ||| |||| | || |||||||| || Sbjct 61956 CAATGTTCGTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCGCTGTTGATCTGGTGG 61897 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||| ||||| |||| |||| || || | | | |||||| | ||| Sbjct 61896 GATTCCTTCTTTATCTTGGATTT-TTGCTTTAACATTCTCGATCGTGTCAGAAGCCTCAA 61838 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTA 18330 |||| ||| || | || || ||||| |||||||||||||| ||||| |||| Sbjct 61837 CCTCAAGGGTAATCGTCTTCCCCGTCAAAGTTTTTACAAAAATCTGCATGTTTA 61784 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || ||||| | |||| ||||| || |||||||||||||| || || |||| Sbjct 64582 TCCGCCTCGAAGTCTTAAAACCAAATGAAGAGTGGATTCTTTTTGAATATTATAATCGGA 64523 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| || ||| |||| |||||| || ||| |||| | |||||||||||| || Sbjct 64522 TAGCGTTCGACCATCCTCCAGTTGTTTACCGGCAAAGATCAATCTTTGTTGATCTGGTGG 64463 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || || || || ||||| |||||| | | | |||||| | || Sbjct 64462 GATTCCCTCTTTGTCTTGAATTTTAGCCTTGACGTTCTCGATGGTGTCAGAAGCTTCAAC 64403 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | |||||| |||| || || || ||||| || ||||||||||| Sbjct 64402 TTCCAAGGTGATAGTTTTACCAGTAAAAGTTTTAACGAAAATTTGCAT 64355 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | ||| |||| |||||||||||||| |||||||| || || |||| Sbjct 63442 TCCACCACGAAGACGAAGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGA 63383 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || | |||||| | ||| || || ||| | || | |||||||||||| || Sbjct 63382 CAAAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTTTGTTGATCTGGTGG 63323 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || || || || ||||| ||| || | | | |||||| | || Sbjct 63322 GATTCCCTCTTTGTCTTGAATTTTAGCCTTAACGTTCTCGATGGTGTCAGAAGCTTCAAC 63263 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | |||||| |||| || ||||| |||||||| |||||||||||| Sbjct 63262 TTCCAAGGTGATAGTTTTACCAGTCAAGGTTTTTACGAAAATTTGCATT 63214 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | || |||| |||||| || ||||||||||| || ||||| || | Sbjct 64126 TCCACCTCGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGGATATTGTAATCAGA 64067 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || || |||||| |||||||| || || |||| | |||||| ||||| || Sbjct 64066 CAAGGTGCGACCATCTTCTAATTGTTTACCGGCGAAGATCAATCTTTGCTGATCTGGTGG 64007 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | || || || || ||||| |||| || || | ||| ||||| | || Sbjct 64006 AATTCCCTCTTTGTCCTGAATTT-TTGCTTTTACATTCTCAATGGTGTCGGAAGCTTCAA 63948 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||||| || ||| |||| || || || ||||| || |||||||||||| Sbjct 63947 CTTCAAGAGTAATGGTTTTACCAGTTAAAGTTTTGACGAAAATTTGCATT 63898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379174788867000