Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq33810 208 1e-48 seq17032 89.7 6e-13 >seq33810 Length=88678 Score = 208 bits (230), Expect = 1e-48 Identities = 386/561 (69%), Gaps = 14/561 (2%) Strand=Plus/Minus Query 62788 TACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAA 62847 ||||||| ||||| ||||| ||| || | |||||||| || || || || ||||| Sbjct 66806 TACCGATTGGTCTGTGTCTGAAATTGGATTTCTCAGCTTCGGGTATTGGGTAGAAATTAT 66747 Query 62848 TATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCACATCCTTCAG-TTTG 62903 | || |||||||||| | ||||| |||||| | | | | || ||||| |||| Sbjct 66746 TGTCAATAATTTTATCTAAGTTTCTAGTAACAATTTTTGTTATC---TCTTTCAGCTTTG 66690 Query 62904 AGAAAATCAAA-----TCGCCCATCTATT-ACAAACATGTTCAATGCAACAGATGCCAGA 62957 | ||| ||||| | | | ||| || |||||||| | |||| || |||| | Sbjct 66689 A-AAAGTCAAAAGTTTTAGTACTGGAATTGACGAACATGTTAACAGCAATTGAAGCCAAA 66631 Query 62958 TTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 63017 || || ||||| || |||| | | | |||||| || || |||||||| |||||||| Sbjct 66630 TTGCAAACGGCCACTTCATCTGGACTAGAATATTGAATAATTTCAGTGCAGAGATTACTG 66571 Query 63018 CACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 63077 || || |||||||| | |||||||||||| ||| | || || ||| || || || Sbjct 66570 CATTTTATAGTTCCAATATTTTGTTGATTTGATTTTCTATTGCAGTGATCTTTGTACAGC 66511 Query 63078 ATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 63137 ||| | || || || ||||||| || || | ||| || |||| | | | || || Sbjct 66510 ATGTAAGGGGTCCCGGTTTCAACTTGTGAAATCAAAATTGCAGTCCATAGGTCACGCGCT 66451 Query 63138 TTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCG 63197 || ||| | |||| || | | ||| |||||||| ||||| | || || || Sbjct 66450 TTAATTTGACGTTTGAATTTGCCTTCCGTTTCGTATTTTGTATAGAGAACATCAAATTCT 66391 Query 63198 TCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63257 ||||||||||||| | | | ||| |||| | |||||||| || | |||| |||| Sbjct 66390 TCTCCCCAAACATCAGCAAGACCTGGAGATTCGTGAGGACACATTAAGGTCCACATTCCG 66331 Query 63258 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTT 63317 || ||| | || ||||||||||| | ||| |||||||||||| | ||||| || || Sbjct 66330 TCGTCCATTACACGTTTCATAAATAAATCCGGAATCCAAAGACCATAAAATAATTCCCTC 66271 Query 63318 GTTCTATGTTCCTCGTTTCCT 63338 | | || |||||| |||||| Sbjct 66270 GCGCGATATTCCTCTTTTCCT 66250 Score = 136 bits (150), Expect = 5e-27 Identities = 180/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 62316 ATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGA 62375 ||||| ||| || || || || | ||| | ||||| || |||||| || | | ||| Sbjct 67434 ATAATTTCATTTTTCATATCTTCGTCCCACAGATTTCTTTCAGTTAAATCTTTCAAAAGA 67375 Query 62376 TGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTA 62435 || |||||||| | ||| |||||||| || | || | | | ||||||||||| || Sbjct 67374 TGAGGGTTAACAATTTGAAATTCTCCCGAGAGAACGCGTCTTGAATAAATATTACTTGTG 67315 Query 62436 TACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGT 62495 |||||||| | || ||||| || ||||||||||| |||||||| || || ||||| || Sbjct 67314 TACGGTTCAATTGATTCATTGTTGCCCAAAATTTGTGCAGTTGAAGCTGTTGGCATTGGA 67255 Query 62496 GCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAA 62555 || | |||||| ||| | || || | ||| |||||| | |||| | || |||| Sbjct 67254 GCTAACAATAACGAATTACGAACTCCATGAGTTGCGATTTTTGCCTTTAAAGCTTGCCAA 67195 Query 62556 TTCCAAAGAT 62565 | |||||||| Sbjct 67194 TCCCAAAGAT 67185 Score = 102 bits (112), Expect = 1e-16 Identities = 193/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 63336 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63395 || ||||| || || | |||||| || | | ||| |||| |||||| ||||| | || Sbjct 66170 CCAGTATTTTTCTTTAAATCGAGAAATTCGAAAATGTCAGCATGCCATGGTTCAATATAA 66111 Query 63396 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63455 || || | |||| || | ||||||||| || ||||| | ||||| |||||| ||||| Sbjct 66110 ATTGCAAATGCTCCCGGTCTTTTGTTTCCACCTTGATCAACGTATCGAGCGGTACTATTA 66051 Query 63456 TAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCT 63515 |||||||| | ||| |||| || ||| || ||| || | || || | ||| | Sbjct 66050 TAAACTCTAATCATAGGAACAAGACCATTGGATTCTCCTTGAGTTCCTGCGATGCGAGTT 65991 Query 63516 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63575 || |||| | ||| | || | || ||||| || || |||| || | | Sbjct 65990 CCTTTGGCTCTGATACAATGAACGTTAACGCCAATTCCACCAGCGGATTTACTAATGAGT 65931 Query 63576 GCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATC 63619 || ||| |||||| ||||| || |||||||| || || || || Sbjct 65930 GCACATTTTTTTAATGTGTCGTATATGCCTTCAATACTGTCTTC 65887 >seq17032 Length=5332 Score = 89.7 bits (98), Expect = 6e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127 || |||| ||| |||||||| || ||||||||||| |||||||| ||||||||||| | | Sbjct 870 TTGGATAAATCAACTTCTTCAACAGTCCAAAATGAAGCCTCTGCTTTTTTATACATCTGC 929 Query 34128 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGATA 34187 || || || | |||| || || || | |||||||| | |||||| | || | | Sbjct 930 CAAATATCTGGCCATTGAATGGGAAATACAACAAATCGACGAGGATTTTCTTTGAGAAGA 989 Query 34188 GGTTCCA 34194 ||||||| Sbjct 990 GGTTCCA 996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629529458448000