Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq33810 113 4e-20 seq17032 95.1 1e-14 seq29084 86.0 6e-12 >seq33810 Length=88678 Score = 113 bits (124), Expect = 4e-20 Identities = 185/264 (70%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 38107 AGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTT 38166 ||||| ||||| || ||||| ||||||||||| |||||||| | | |||||| |||||| Sbjct 66149 AGAAATTCGAAAATGTCAGCATGCCATGGTTCAATATAAATTGCAAATGCTCCCGGTCTT 66090 Query 38167 TTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACT 38226 || | || || |||| || |||| | | || ||||||| | ||| | |||||| || Sbjct 66089 TTGTTTCCACCTTGATCAACGTATCGAGCGGTACTATTATAAACTCTAATCATAGGAACA 66030 Query 38227 ATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTT 38286 | |||||| |||| || | | || | || ||| || || |||| ||| | | Sbjct 66029 AGACCATTGGATTCTCCTTGAGTTCCTGCGATGCGAGTTCCTTTGGCTCTGATA-CAATG 65971 Query 38287 ATCGACAA-TCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATC 38345 | || || || |||||||| || ||| || | || |||| |||||| || || Sbjct 65970 AACGTTAACGCCAATTCCACCAGCGGATTTACTAATGAGTGCACATTTTTTTAATGTGTC 65911 Query 38346 AAATATACCTTCTATACTGTCATC 38369 |||| ||||| |||||||| || Sbjct 65910 GTATATGCCTTCAATACTGTCTTC 65887 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 38430 TGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATC 38489 ||| || || ||||| |||| || ||| || ||||||||||| || || || || | Sbjct 65723 TGTTGGTGACGCATGAGTGAAATATCGTTCAGATAAATAATTATAGGTCTCAATGACTTT 65664 Query 38490 ATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || | ||| | | |||||| ||| | || ||||||| ||||||||| || ||||| Sbjct 65663 GTCAACATCTTCACGATGAATAGCTACTGCAACTCTCATTAACATATGTTGAGGCCTTTC 65604 Query 38550 TATTATTTTATTATTCT-GTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAAT 38608 | | ||| | ||| |||||||| ||| | ||| |||||||| | |||||||| Sbjct 65603 AACAACTTT-TCCGTCTATTTTAAGTAAATAACTTCGTTCCAATGTTTTGAATCCAAAAT 65545 Query 38609 AACTATATGAATAATCTCTATCGTA 38633 || |||| | |||| | ||| || Sbjct 65544 AATTATAACTAAAATCGCGATCATA 65520 >seq17032 Length=5332 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/191 (72%), Gaps = 8/191 (4%) Strand=Plus/Plus Query 11886 TATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCA 11945 || |||| || | || || || || | || | ||||||||| ||||||| ||||||| Sbjct 411 TAATATCACTAATGTAAGTGTCGATCAGTAGAGAATACATTTCAGAATGAACGTTTTCCA 470 Query 11946 TAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACATCCACATAAAAT 12004 | || | |||||||||||||||||| || ||||||| ||| || || || ||| Sbjct 471 TGGCCACTTGAAATCCATAGAAACAACGAGCCTCTG-TCACTTGAACTTCTTGGCTAAAG 529 Query 12005 CTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCA---AAAAATGCTAGTATA 12061 | |||| | ||||| || || |||||||| || |||||| ||||| |||| ||| Sbjct 530 CGTTCCACCAAATTTTCGTTAACAATACCGTC---GGATGCAGCGAAAAAGGCTAAAATA 586 Query 12062 TGTTTTATAAA 12072 ||| ||||| Sbjct 587 TGTGAAATAAA 597 >seq29084 Length=6691 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 11432 ACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGAC 11491 |||||| ||| || ||||| | || ||| || || || ||||| || ||||| || Sbjct 790 ACTTTTGGACATCCCAACTCAAGAAGTAGTCTGTCGGCAACAAATTCAATGTACTGGCAC 731 Query 11492 ATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTT 11551 || || |||||||| || || | ||||| || | ||| | || |||||||| | | Sbjct 730 ATCAATTTGCAATTCATGCCGATCATTTCCACAGGCAAAGCGTCAGTTAAAAACTCTTGT 671 Query 11552 TCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAAT 11611 || ||| || || || | ||||| || | | ||| ||||||||| || | Sbjct 670 TCAATAGACACTGCGTCTTTAATTATTGAAATCACTCGTTCTTTAGATGGTTTTTGAACG 611 Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTA 11648 | ||||||||||| | |||||| || ||||| |||| Sbjct 610 ATGTGTTTAAACATCAGACACGCGAAGTCACAGTGTA 574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468310449904000