Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq33810 217 2e-51 seq29084 105 9e-18 seq17032 95.1 2e-14 >seq33810 Length=88678 Score = 217 bits (240), Expect = 2e-51 Identities = 389/561 (69%), Gaps = 14/561 (2%) Strand=Plus/Minus Query 65581 TACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAA 65640 ||||||| ||||| ||||| ||| || | |||||||| || || || || ||||| Sbjct 66806 TACCGATTGGTCTGTGTCTGAAATTGGATTTCTCAGCTTCGGGTATTGGGTAGAAATTAT 66747 Query 65641 TATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCACATCCTTCAG-TTTG 65696 | || |||||||||| | ||||| |||||| | | | | || ||||| |||| Sbjct 66746 TGTCAATAATTTTATCTAAGTTTCTAGTAACAATTTTTGTTATC---TCTTTCAGCTTTG 66690 Query 65697 AGAAAATCAAATCGCTCAT--CT---ATT-ACAAACATGTTCAATGCAACAGATGCCAGA 65750 | ||| ||||| | | || ||| || |||||||| | |||| || |||| | Sbjct 66689 A-AAAGTCAAAAGTTTTAGTACTGGAATTGACGAACATGTTAACAGCAATTGAAGCCAAA 66631 Query 65751 TTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 65810 || |||||||| || |||| | | | |||||| || || |||||||| |||||||| Sbjct 66630 TTGCAAACGGCCACTTCATCTGGACTAGAATATTGAATAATTTCAGTGCAGAGATTACTG 66571 Query 65811 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 65870 || || || ||||| | |||||||||||| ||| | || || ||| || || || Sbjct 66570 CATTTTATAGTTCCAATATTTTGTTGATTTGATTTTCTATTGCAGTGATCTTTGTACAGC 66511 Query 65871 ATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 65930 ||| | || || || ||||||| || || | ||| || |||| | | | || || Sbjct 66510 ATGTAAGGGGTCCCGGTTTCAACTTGTGAAATCAAAATTGCAGTCCATAGGTCACGCGCT 66451 Query 65931 TTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 65990 || ||| | |||| || | ||| |||||||| |||||| | || || || Sbjct 66450 TTAATTTGACGTTTGAATTTGCCTTCCGTTTCGTATTTTGTATAGAGAACATCAAATTCT 66391 Query 65991 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 66050 ||||||||||||| | | || ||| |||| | |||||||| || | |||| |||| Sbjct 66390 TCTCCCCAAACATCAGCAAGACCTGGAGATTCGTGAGGACACATTAAGGTCCACATTCCG 66331 Query 66051 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTG 66110 || ||| | || ||||||||||| | ||| |||||||||||| | |||||| || || Sbjct 66330 TCGTCCATTACACGTTTCATAAATAAATCCGGAATCCAAAGACCATAAAATAATTCCCTC 66271 Query 66111 GTTCTATGTTCCTCGTTTCCT 66131 | | || |||||| |||||| Sbjct 66270 GCGCGATATTCCTCTTTTCCT 66250 Score = 143 bits (158), Expect = 4e-29 Identities = 195/272 (72%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 65087 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 65146 ||||| || ||| | ||| ||||| ||| || || || || | ||| | ||||| Sbjct 67456 CTGAACTGAGCCATTGTTTGCTATAATTTCATTTTTCATATCTTCGTCCCACAGATTTCT 67397 Query 65147 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 65206 || |||||| || | | ||||| || ||||| | |||||||||||| || | || | Sbjct 67396 TTCAGTTAAATCTTTCAAAAGATGAGGGTTAACAATTTGAAATTCTCCCGAGAGAACGCG 67337 Query 65207 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 65266 | | ||||||||||| || |||||||| | || ||||| || ||||||||||| || Sbjct 67336 TCTTGAATAAATATTACTTGTGTACGGTTCAATTGATTCATTGTTGCCCAAAATTTGTGC 67277 Query 65267 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 65326 |||||| || || ||||| || || | |||||| ||| | || || | ||| ||| Sbjct 67276 AGTTGAAGCTGTTGGCATTGGAGCTAACAATAACGAATTACGAACTCCATGAGTTGCGAT 67217 Query 65327 TTTATCTTTTAGAGGTTCCCAATTCCAAAGAT 65358 ||| | |||| || || ||||| |||||||| Sbjct 67216 TTTTGCCTTTAAAGCTTGCCAATCCCAAAGAT 67185 Score = 105 bits (116), Expect = 9e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 66129 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTAT 66188 || ||||| || || | |||||| || | | ||| ||| |||||| ||||| | || Sbjct 66170 CCAGTATTTTTCTTTAAATCGAGAAATTCGAAAATGTCAGCATGCCATGGTTCAATATAA 66111 Query 66189 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 66248 || || | |||| || | ||||||||| || ||||| | ||||| |||||| ||||| Sbjct 66110 ATTGCAAATGCTCCCGGTCTTTTGTTTCCACCTTGATCAACGTATCGAGCGGTACTATTA 66051 Query 66249 TAAACTCTCAACATTGGAATAATACCATTGGAT 66281 |||||||| | ||| |||| || |||||||||| Sbjct 66050 TAAACTCTAATCATAGGAACAAGACCATTGGAT 66018 >seq29084 Length=6691 Score = 105 bits (116), Expect = 9e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 35962 TTTTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCAT 36021 |||| | ||||||| ||| || | ||| || || |||||||| || || ||| Sbjct 788 TTTTGGACATCCCAACTCAAGAAGTAGTCTGTCGGCAACAAATTCAATGTACTGGCACAT 729 Query 36022 CATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTC 36081 || || |||||||| || || | || || || | ||| |||| | ||| |||||||| Sbjct 728 CAATTTGCAATTCATGCCGATCATTTCCACAGGCAAAGCGTCAGTTAAAAACTCTTGTTC 669 Query 36082 AATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAA 36141 |||||| || |||||| | || || || || ||| ||||| | ||| | | | Sbjct 668 AATAGACACTGCGTCTTTAATTATTGAAATCACTCGTTCTTTAGATGGTTTTTGAACGAT 609 Query 36142 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 36182 ||||||||||||| ||| ||||| || |||||||| |||| Sbjct 608 GTGTTTAAACATCAGACACGCGAAGTCACAGTGTAGTCCCT 568 >seq17032 Length=5332 Score = 95.1 bits (104), Expect = 2e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703 || |||| ||| |||||||| || ||||||||||| |||||||| ||||||||||| | | Sbjct 870 TTGGATAAATCAACTTCTTCAACAGTCCAAAATGAAGCCTCTGCTTTTTTATACATCTGC 929 Query 36704 CAGATGTCATGATATTGAATTGGAAAAATAACAAATC 36740 || || || | ||||||| ||||| | |||||||| Sbjct 930 CAAATATCTGGCCATTGAATGGGAAATACAACAAATC 966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657871685944000