Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq63 98.7 1e-15 seq23433 89.7 5e-13 >seq63 Length=129227 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 |||||||| | | ||||| || |||| || || ||||||||||| ||||||||| Sbjct 64581 CCGCCTCGAAGTCTTAAAACCAAATGAAGAGTGGATTCTTTTTGAATATTATAATCG--G 64524 Query 139598 ATTGTGCTCGA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || | | |||| || || || |||||||| ||| |||||| | ||| ||||| || | Sbjct 64523 ATAGCGTTCGACCATCCTCCAGTTGTTTACCGGCAAAGATCAATCTTTGTTGATCTGGTG 64464 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 | || || |||||||| ||| |||| | || | | || | ||||| | | || Sbjct 64463 GGATTCCCTCTTTGTC-TTGAATTTTAGCCTTGACGTTCTCGATGGTGTCAGAAGCTTCA 64405 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || | ||| | || || || || || ||||| ||||| ||||||||| Sbjct 64404 ACTTCCAAGGTGATAGTTTTACCAGTAAAAGTTTTAACGAAAATTTGCATA 64354 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| || |||| || || || |||||||| ||||||||| | Sbjct 63441 CCACCACGAAGACGAAGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGAC 63382 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| || || || |||||| | |||| | ||| ||||| || || Sbjct 63381 AAAGTACGTCCA-TCTTCAAGTTGCTTTCCAGCAAAAATCAATCTTTGTTGATCTGGTGG 63323 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCA 139715 || || |||||||| ||| |||| | ||| | | || | ||||| | | || | Sbjct 63322 GATTCCCTCTTTGTCT-TGAATTTTAGCCTTAACGTTCTCGATGGTGTCAGAAGCTTCAA 63264 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || | ||| | || || || ||||| ||||||||||| |||||||| Sbjct 63263 CTTCCAAGGTGATAGTTTTACCAGTCAAGGTTTTTACGAAAATTTGCAT 63215 Score = 86.0 bits (94), Expect = 6e-12 Identities = 96/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 |||||| || | |||||| ||||| ||||| |||||||| || |||| ||||| Sbjct 62847 AACTAAATGCAACGTAGATTCTTTCTGAATATTATAATCAGACAAGGTGCGACCATCTTC 62788 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 | |||||||| ||| |||||| | ||||||||| || || || ||||||||||| | Sbjct 62787 TAATTGTTTACCGGCAAAGATCAATCTTTGCTGATCTGGTGGAATTCCTTCTTTGTC-TT 62729 Query 139675 GATTTTT 139681 || |||| Sbjct 62728 GAATTTT 62722 >seq23433 Length=22481 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 139575 CTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGA 139634 ||||||||||||||||||| | || || ||||| || ||||| ||||| | | Sbjct 13907 CTTTTTGAATGTTATAATCAGAAAGAGTCCTTCCATCTTCAAGTTGTTTGCCAGCGAAAA 13848 Query 139635 TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGT 139693 | || || || ||||| ||||| ||||| || || || ||| |||| | || | | | Sbjct 13847 TAAGTCGCTGTTGATCTGGAGGAATGCCCTCCTTATC-TTGAATTTTGGCCTTCACATTT 13789 Query 139694 TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACG 139753 || | |||||| | || ||| ||||||| ||| | || || || || | ||||| ||| Sbjct 13788 TCAATTGTGTCTGAGGCCTCAACCTCAAGGGTTATGGTTTTACCCGTAAGAGTTTTAACG 13729 Query 139754 AATATTTGCAT 139764 || || ||||| Sbjct 13728 AAGATCTGCAT 13718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495837050720000