Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq33810 217 2e-51 seq29084 87.8 3e-12 seq17032 87.8 3e-12 >seq33810 Length=88678 Score = 217 bits (240), Expect = 2e-51 Identities = 389/561 (69%), Gaps = 14/561 (2%) Strand=Plus/Minus Query 79460 TACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAA 79519 ||||||| ||||| ||||| ||| || | |||||||| || || || || ||||| Sbjct 66806 TACCGATTGGTCTGTGTCTGAAATTGGATTTCTCAGCTTCGGGTATTGGGTAGAAATTAT 66747 Query 79520 TATCTATAATTTTAT-TGAGATTCCTG--ACTATTACTTTGACCACATCCTTTAG-TTTG 79575 | || |||||||||| | || ||| | || ||| | | | | || || || |||| Sbjct 66746 TGTCAATAATTTTATCTAAGTTTCTAGTAACAATTTTTGTTATC---TCTTTCAGCTTTG 66690 Query 79576 AGAAAATCAAA-----TCGTCCATCTATT-ACAAACATGTTCAACGCGACAGATGCCAGA 79629 | ||| ||||| | || | ||| || |||||||| | || | || |||| | Sbjct 66689 A-AAAGTCAAAAGTTTTAGTACTGGAATTGACGAACATGTTAACAGCAATTGAAGCCAAA 66631 Query 79630 TTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTA 79689 || |||||||| || |||| | | | |||||| || |||||||||||||| ||||| Sbjct 66630 TTGCAAACGGCCACTTCATCTGGACTAGAATATTGAATAATTTCAGTGCAGAGATTACTG 66571 Query 79690 CACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 79749 || || || ||||| | |||||||||||| ||| | || || ||| || || || Sbjct 66570 CATTTTATAGTTCCAATATTTTGTTGATTTGATTTTCTATTGCAGTGATCTTTGTACAGC 66511 Query 79750 ATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 79809 ||| | || || || ||||||| || || | ||| || |||| | | | || || Sbjct 66510 ATGTAAGGGGTCCCGGTTTCAACTTGTGAAATCAAAATTGCAGTCCATAGGTCACGCGCT 66451 Query 79810 TTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCG 79869 || ||| | ||| || | ||| ||||||||| |||||| | || || || Sbjct 66450 TTAATTTGACGTTTGAATTTGCCTTCCGTTTCGTATTTTGTATAGAGAACATCAAATTCT 66391 Query 79870 TCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCA 79929 |||||||||||||| | | || ||| |||||| ||||||||| || | |||| ||| Sbjct 66390 TCTCCCCAAACATCAGCAAGACCTGGAGATTCGTGAGGACACATTAAGGTCCACATTCCG 66331 Query 79930 TCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 79989 || ||| |||| ||||||||||| | ||| |||||||||||| | ||||| || || Sbjct 66330 TCGTCCATTACACGTTTCATAAATAAATCCGGAATCCAAAGACCATAAAATAATTCCCTC 66271 Query 79990 GTTCTATGCTCCTCGTTTCCT 80010 | | || ||||| |||||| Sbjct 66270 GCGCGATATTCCTCTTTTCCT 66250 Score = 159 bits (176), Expect = 5e-34 Identities = 217/303 (72%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 78966 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCT 79025 ||||| || ||| | ||| ||||| ||| || || ||||| | ||| | ||||| Sbjct 67456 CTGAACTGAGCCATTGTTTGCTATAATTTCATTTTTCATATCTTCGTCCCACAGATTTCT 67397 Query 79026 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 79085 || |||||| || | | ||||| || ||||| | |||||||||||| || | || | Sbjct 67396 TTCAGTTAAATCTTTCAAAAGATGAGGGTTAACAATTTGAAATTCTCCCGAGAGAACGCG 67337 Query 79086 CCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGC 79145 | | ||||||||||| || || ||||| | |||||||| || ||||||||||| || Sbjct 67336 TCTTGAATAAATATTACTTGTGTACGGTTCAATTGATTCATTGTTGCCCAAAATTTGTGC 67277 Query 79146 AGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGAT 79205 |||||| || |||||||| || || | |||||| ||| | || || | | | ||| Sbjct 67276 AGTTGAAGCTGTTGGCATTGGAGCTAACAATAACGAATTACGAACTCCATGAGTTGCGAT 67217 Query 79206 TTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATA 79265 ||| | |||| || || |||||||||||||| | || |||||||| | ||||| Sbjct 67216 TTTTGCCTTTAAAGCTTGCCAATCCCAAAGATTTGTTGGCGTTACATTCCACATGTCATA 67157 Query 79266 TTG 79268 ||| Sbjct 67156 TTG 67154 Score = 118 bits (130), Expect = 2e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 80008 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 80067 || ||||| || || | |||||| || | | ||| |||| |||||| ||||| | || Sbjct 66170 CCAGTATTTTTCTTTAAATCGAGAAATTCGAAAATGTCAGCATGCCATGGTTCAATATAA 66111 Query 80068 ATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 80127 || || | ||||||||| ||||||||| || ||||| | ||||| |||||| ||||| Sbjct 66110 ATTGCAAATGCTCCCGGTCTTTTGTTTCCACCTTGATCAACGTATCGAGCGGTACTATTA 66051 Query 80128 TAAACTCTCAACATTGGAATAATACCATTGGAT 80160 |||||||| | ||| |||| || |||||||||| Sbjct 66050 TAAACTCTAATCATAGGAACAAGACCATTGGAT 66018 >seq29084 Length=6691 Score = 87.8 bits (96), Expect = 3e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 49764 TTTTTTAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCAT 49823 |||| | ||||||| ||| || | ||| || || |||||||| || || ||| Sbjct 788 TTTTGGACATCCCAACTCAAGAAGTAGTCTGTCGGCAACAAATTCAATGTACTGGCACAT 729 Query 49824 CATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTC 49883 || || |||||||| || || | || || || | ||| |||| | ||| |||||||| Sbjct 728 CAATTTGCAATTCATGCCGATCATTTCCACAGGCAAAGCGTCAGTTAAAAACTCTTGTTC 669 Query 49884 AATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAA 49943 ||| || || || ||| | || || || | || ||||| | ||| || | | Sbjct 668 AATAGACACTGCGTCTTTAATTATTGAAATCACTCGTTCTTTAGATGGTTTTTGAACGAT 609 Query 49944 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 49984 ||||||||||||| ||| ||||| || ||||| || |||| Sbjct 608 GTGTTTAAACATCAGACACGCGAAGTCACAGTGTAGTCCCT 568 Score = 84.2 bits (92), Expect = 3e-11 Identities = 156/225 (69%), Gaps = 7/225 (3%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||| |||||||| ||| || || || ||||| || || | ||| | Sbjct 445 CCTCATCTCTGGAAATGAGTTCGTTACTAAAAGTCAGACCAGGCATGAGTCCTCTCTTCT 386 Query 50042 TAAGCCAAAATATGGACGCAAA--TGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAA 50099 | ||||| || || || ||||| || | | ||| |||||||||||| || || ||||| Sbjct 385 TTAGCCAGAAAATTGATGCAAAACTGCCGCTGAA--GAAGATTCCTTCCACCGCCGCAAA 328 Query 50100 GGCAACAAGTCTCTCTCCATAACTGGC-GCT--GTCATGTATCCACTTTTGAGCCCAATC 50156 |||| | | || || || | || | | || | |||||| || ||||||| | Sbjct 327 TGCAATCACACGTTCAGCAAAAGTTGCAGATTCGTTACTTATCCAGTTAAGAGCCCATTG 268 Query 50157 GGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 50201 || |||||| || ||||| | ||||| || ||||| || || Sbjct 267 TGCTTTCTTTGCAACGCAAGGTAGAGTTTCGATAGCATTGAATAG 223 >seq17032 Length=5332 Score = 87.8 bits (96), Expect = 3e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 || |||| ||| |||||||| || ||||||||||| |||||||| ||||||||||| | | Sbjct 870 TTGGATAAATCAACTTCTTCAACAGTCCAAAATGAAGCCTCTGCTTTTTTATACATCTGC 929 Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553 || || || | |||| || || || | |||||||| | |||||| Sbjct 930 CAAATATCTGGCCATTGAATGGGAAATACAACAAATCGACGAGGATTT 977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717940192024000