Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq33810 196 6e-45 seq17032 123 3e-23 seq29084 87.8 2e-12 >seq33810 Length=88678 Score = 196 bits (216), Expect = 6e-45 Identities = 384/561 (68%), Gaps = 14/561 (2%) Strand=Plus/Minus Query 71543 TACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAA 71602 ||||||| ||||||||||| ||| || | |||||||| || || || || ||||| Sbjct 66806 TACCGATTGGTCTGTGTCTGAAATTGGATTTCTCAGCTTCGGGTATTGGGTAGAAATTAT 66747 Query 71603 TATCTATAATTTTATTGAGATTTCTG---ACTATTACTTTGACCACATCCTTTAG-TTTG 71658 | || |||||||||| | ||||| || ||| | | | | || || || |||| Sbjct 66746 TGTCAATAATTTTATCTAAGTTTCTAGTAACAATTTTTGTTATC---TCTTTCAGCTTTG 66690 Query 71659 AGAAAATCAAATCTCCCAT--CT---ATT-ACAAACACGTTCAAGGCAACAGATGCCAGA 71712 | ||| ||||| | | || ||| || |||| ||| | |||| || |||| | Sbjct 66689 A-AAAGTCAAAAGTTTTAGTACTGGAATTGACGAACATGTTAACAGCAATTGAAGCCAAA 66631 Query 71713 TTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTA 71772 || |||||||| || |||| | | | |||||| |||||||||||||| |||||||| Sbjct 66630 TTGCAAACGGCCACTTCATCTGGACTAGAATATTGAATAATTTCAGTGCAGAGATTACTG 66571 Query 71773 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 71832 || || || ||||| | |||||||||||| ||| | || || ||| || || || Sbjct 66570 CATTTTATAGTTCCAATATTTTGTTGATTTGATTTTCTATTGCAGTGATCTTTGTACAGC 66511 Query 71833 ATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 71892 || | || || || ||||||| || || | ||| || |||| | | | || || Sbjct 66510 ATGTAAGGGGTCCCGGTTTCAACTTGTGAAATCAAAATTGCAGTCCATAGGTCACGCGCT 66451 Query 71893 TTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCG 71952 || ||| | ||| || | ||| ||||||||| |||||| | || || || Sbjct 66450 TTAATTTGACGTTTGAATTTGCCTTCCGTTTCGTATTTTGTATAGAGAACATCAAATTCT 66391 Query 71953 TCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCA 72012 ||||||||| ||| | | || ||| |||| | |||||||| || | |||| ||| Sbjct 66390 TCTCCCCAAACATCAGCAAGACCTGGAGATTCGTGAGGACACATTAAGGTCCACATTCCG 66331 Query 72013 TCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 72072 || || |||| ||||||||||| | ||| |||||||||||| | ||||| || || Sbjct 66330 TCGTCCATTACACGTTTCATAAATAAATCCGGAATCCAAAGACCATAAAATAATTCCCTC 66271 Query 72073 GTTCTATGCTCCTCGTTTCCT 72093 | | || ||||| |||||| Sbjct 66270 GCGCGATATTCCTCTTTTCCT 66250 Score = 161 bits (178), Expect = 1e-34 Identities = 199/272 (73%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 71049 CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT 71108 ||||| || ||| | ||| ||||| |||||| || ||||| | ||| | ||||| Sbjct 67456 CTGAACTGAGCCATTGTTTGCTATAATTTCATTTTTCATATCTTCGTCCCACAGATTTCT 67397 Query 71109 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCT 71168 || |||||| || | | |||||||| ||||| | |||||||||||| || | || | Sbjct 67396 TTCAGTTAAATCTTTCAAAAGATGAGGGTTAACAATTTGAAATTCTCCCGAGAGAACGCG 67337 Query 71169 ACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGC 71228 | | ||||||||||| || |||||||| | ||| ||||| || ||||||||||| || Sbjct 67336 TCTTGAATAAATATTACTTGTGTACGGTTCAATTGATTCATTGTTGCCCAAAATTTGTGC 67277 Query 71229 AGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGAT 71288 |||||| || || ||||| || || | ||||| ||| | || ||||| | | ||| Sbjct 67276 AGTTGAAGCTGTTGGCATTGGAGCTAACAATAACGAATTACGAACTCCATGAGTTGCGAT 67217 Query 71289 TTTATCTTTTAGAGATTCCCAATTCCAAAGAT 71320 ||| | |||| || || ||||| |||||||| Sbjct 67216 TTTTGCCTTTAAAGCTTGCCAATCCCAAAGAT 67185 Score = 116 bits (128), Expect = 5e-21 Identities = 196/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 72091 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 72150 || ||||| || || | |||||| || | | ||| |||| |||||| ||||| | || Sbjct 66170 CCAGTATTTTTCTTTAAATCGAGAAATTCGAAAATGTCAGCATGCCATGGTTCAATATAA 66111 Query 72151 ATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 72210 || || | ||||||| | ||||||||| || ||||| | ||||| |||||| ||||| Sbjct 66110 ATTGCAAATGCTCCCGGTCTTTTGTTTCCACCTTGATCAACGTATCGAGCGGTACTATTA 66051 Query 72211 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 72270 |||||||| | ||| |||| || |||||||||| | || | || || | ||| || Sbjct 66050 TAAACTCTAATCATAGGAACAAGACCATTGGATTCTCCTTGAGTTCCTGCGATGCGAGTT 65991 Query 72271 CCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330 || |||| | ||| || | || ||||| || || |||| || | | Sbjct 65990 CCTTTGGCTCTGATACAATGAACGTTAACGCCAATTCCACCAGCGGATTTACTAATGAGT 65931 Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 72374 || ||| |||||| || || || ||||| || ||||| || || Sbjct 65930 GCACATTTTTTTAATGTGTCGTATATGCCTTCAATACTGTCTTC 65887 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 71398 CCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAA 71457 |||| || ||| || | ||||||||| ||||| |||||||||||||||| ||||| || Sbjct 67035 CCTTTTTCTTCAGCGATTTCACAACTAGCCTCCAATGCTCCATAATAAAGAGTTTCAAAT 66976 Query 71458 ATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAAC 71517 || | |||| | | ||| ||||| || ||||||||| | | | | ||| Sbjct 66975 ATTTGGATATTTAACTTTTGAGCTTCTTCACTCTCAAATGGAAAGCGCATTAACAAAAAT 66916 Query 71518 GCGTCTGCTAATCCTTGAACGCCAATACC 71546 || ||||||||||| || | |||||||| Sbjct 66915 GCATCTGCTAATCCCTGTATTCCAATACC 66887 >seq17032 Length=5332 Score = 123 bits (136), Expect = 3e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 42320 TTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCA 42379 ||| |||| ||| || || ||||||| ||| ||||||||| ||||||| |||||| Sbjct 410 TTAATATCACTAATGTAAGTGTCGATCAGTAGAGAATACATTTCAGAATGAACGTTTTCC 469 Query 42380 ATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAAT 42439 ||||||| |||||||| |||||||| | ||||| || || || |||||| | ||| Sbjct 470 ATGGCCACTTGAAATCCATAGAAACAACGAGCCTCTGTCACTTGAACTTCTTGGCTAAAG 529 Query 42440 CGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGT 42499 ||||| | ||||||||||| || || ||||| || || ||||| || || | |||| Sbjct 530 CGTTCCACCAAATTTTCGTTAACAATACCGTCGGATGCAGCGAAAAAGGCTAAAATATGT 589 Query 42500 TTTATAAA 42507 ||||| Sbjct 590 GAAATAAA 597 Score = 91.5 bits (100), Expect = 2e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610 || |||| ||| |||||||| || ||||||||||| || ||||| ||||||||||| | | Sbjct 870 TTGGATAAATCAACTTCTTCAACAGTCCAAAATGAAGCCTCTGCTTTTTTATACATCTGC 929 Query 42611 CAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGATTT 42658 || ||||| | ||||||| || || | |||||||| | |||||| Sbjct 930 CAAATATCTGGCCATTGAATGGGAAATACAACAAATCGACGAGGATTT 977 >seq29084 Length=6691 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 41869 ttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCAT 41928 |||| | ||||||| ||| || | ||| || || | ||||| || || ||| Sbjct 788 TTTTGGACATCCCAACTCAAGAAGTAGTCTGTCGGCAACAAATTCAATGTACTGGCACAT 729 Query 41929 CATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTC 41988 || || |||||||| || || | || || || | ||| |||| | ||| |||||||| Sbjct 728 CAATTTGCAATTCATGCCGATCATTTCCACAGGCAAAGCGTCAGTTAAAAACTCTTGTTC 669 Query 41989 AATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAA 42048 |||||| || |||||| | || || || | ||| ||||| | ||| | | | Sbjct 668 AATAGACACTGCGTCTTTAATTATTGAAATCACTCGTTCTTTAGATGGTTTTTGAACGAT 609 Query 42049 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 42089 ||||||||||||| ||| ||||| || ||||| || |||| Sbjct 608 GTGTTTAAACATCAGACACGCGAAGTCACAGTGTAGTCCCT 568 Score = 86.0 bits (94), Expect = 8e-12 Identities = 153/223 (69%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| ||| | |||||| ||| || || || ||||| || || | ||| | Sbjct 445 CCTCATCTCTGGAAATGAGTTCGTTACTAAAAGTCAGACCAGGCATGAGTCCTCTCTTCT 386 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| || || || ||||| || |||||||||||||| || |||||||| | Sbjct 385 TTAGCCAGAAAATTGATGCAAAACTGCCGCTGAAGAAGATTCCTTCCACCGCCGCAAATG 326 Query 42207 CAATAAGTCTCTCTCCATAACCGGCA---CTGTCATGTATCCACTTTTGAGCCCAATCGG 42263 |||| | | || || || ||| || | |||||| || ||||||| | | Sbjct 325 CAATCACACGTTCAGCAAAAGTTGCAGATTCGTTACTTATCCAGTTAAGAGCCCATTGTG 266 Query 42264 CCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 | |||||| || ||||| | ||||| || ||||| || || Sbjct 265 CTTTCTTTGCAACGCAAGGTAGAGTTTCGATAGCATTGAATAG 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670832153816000