Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq63 107 2e-18 >seq63 Length=129227 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898 ||||||||||| || || |||||||| ||||| | || || | || || | ||| Sbjct 64329 TGCAACGTAGATTCTTTCTGAATATTATAATCAGACAAGGTGCGACCATCTTCTAATTGT 64270 Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958 ||||| || | || | ||| |||||||| || | ||||||||||| |||||| Sbjct 64269 TTACCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATTCCCTCTTTGTCCTGAATTTTT 64210 Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018 |||||| | | | || ||| || || ||| | |||||||||||||| ||| Sbjct 64209 GCTTTTACATTCTCAATGGTGTCGGAAGCTTCAACTTCAAGAGTAATGGTTTTACCAGTT 64150 Query 19019 AAAGTTTTGACAAAAATTTGCATT 19042 ||||||||||| |||||||||||| Sbjct 64149 AAAGTTTTGACGAAAATTTGCATT 64126 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | || || || ||||| ||||||||||| | || || | || || Sbjct 64107 ACCAAGTGAAGAGTGGATTCTTTTTGGATATTGTAATCAGACAAGGTGCGACCATCTTCT 64048 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 | |||||||| || | || | ||| |||||||| || | ||||||||||| | Sbjct 64047 AATTGTTTACCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATTCCCTCTTTGTCCTGA 63988 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 ||||| |||||| | | | || ||| || || ||| | |||||||||||| Sbjct 63987 ATTTTTGCTTTTACATTCTCAATGGTGTCGGAAGCTTCAACTTCAAGAGTAATGGTTTTA 63928 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || |||||||||||||| |||||||||||| Sbjct 63927 CCAGTTAAAGTTTTGACGAAAATTTGCATT 63898 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC----TCCAG 18894 || ||||| || || || |||||||||||||| | | || |||||| || | Sbjct 62447 TGTAACGTGGATTCTTTCTGAATATTGTAATCAGAGAGCGT----GCGTCCATCTTCTAA 62392 Query 18895 CTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAAT 18954 ||||| || || |||| | |||||||||||| || | ||||||||||| ||| Sbjct 62391 TTGTTTGCCAGCGAAAATCAATCTCTGCTGATCTGGTGGAATTCCCTCTTTGTCTTGAAT 62332 Query 18955 TTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACC 19014 ||| |||||| | ||| || ||| || ||| || | |||||| ||||| || Sbjct 62331 TTTGGCTTTTACATTCTCGATTGTGTCGGAAGCTTCCACCTCCAGGGTAATTGTTTTTCC 62272 Query 19015 TGTTAAAGTTTTGACAAAAATTTGCATT 19042 ||||| |||||||| |||||||||||| Sbjct 62271 GGTTAAGGTTTTGACGAAAATTTGCATT 62244 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873 ||| ||||| | ||||| |||| || | || || || ||||||||||| ||||| | Sbjct 64582 TCCGCCTCGAAGTCTTAAAACCAAATGAAGAGTGGATTCTTTTTGAATATTATAATCGGA 64523 Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933 | ||| | |||||||| |||||||| ||| | || | ||| || ||||| || Sbjct 64522 TAGCGTTCGACCATCCTCCAGTTGTTTACCGGCAAAGATCAATCTTTGTTGATCTGGTGG 64463 Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993 | ||||||||||| |||||| || || | ||| || || || || Sbjct 64462 GATTCCCTCTTTGTCTTGAATTTTAGCCTTGACGTTCTCGATGGTGTCAGAAGCTTCAAC 64403 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| | ||| || |||||||| || |||||||| || ||||||||||| Sbjct 64402 TTCCAAGGTGATAGTTTTACCAGTAAAAGTTTTAACGAAAATTTGCAT 64355 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC----TCCAG 18894 ||||| || || || ||||| ||||||||||| | | || |||||| |||| Sbjct 62219 TGCAAAGTGGATTCTTTTTGGATATTGTAATCGGAAAGCGT----GCGTCCATCTTCCAA 62164 Query 18895 CTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAAT 18954 ||||| || || |||| | |||||||||||| || | |||||||| || ||| Sbjct 62163 TTGTTTGCCAGCGAAAATCAATCTCTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAAT 62104 Query 18955 TTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACC 19014 ||| |||||| | | | ||||| || ||| ||| | ||||||||||| || Sbjct 62103 TTTGGCTTTTACATTCTCAATTGTATCTGAAGCCTCAACTTCAAGAGTAATGGTTTTGCC 62044 Query 19015 TGTTAAAGTTTTGACAAAAATTTGCATT 19042 ||||||||||| || ||||| |||||| Sbjct 62043 AGTTAAAGTTTTAACGAAAATCTGCATT 62016 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/213 (69%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC--- 18889 |||| ||| | || || || ||||| ||||||||||| | | || |||||| Sbjct 63879 ACCAAGTGAAGAGTGGATTCTTTTTGGATATTGTAATCGGAAAGCGT----GCGTCCATC 63824 Query 18890 -TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTC 18948 |||| ||||| || || | || | ||| |||||||| || | ||||||||||| Sbjct 63823 TTCCAATTGTTTGCCAGCGAAGATCAATCTTTGCTGATCTGGTGGTATTCCCTCTTTGTC 63764 Query 18949 GGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGT 19008 ||||||| |||||| | | | || ||| || || ||| | |||||||| Sbjct 63763 TTGAATTTTCGCTTTTACATTCTCAATGGTGTCGGAAGCTTCAACTTCAAGAGTAATGGT 63704 Query 19009 TTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| || ||||||||||| || ||||| ||||| Sbjct 63703 TTTGCCAGTTAAAGTTTTAACGAAAATCTGCAT 63671 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898 ||||||||||| || ||||| ||||| ||||| | | || | || || || ||| Sbjct 63645 TGCAACGTAGATTCTTTTTGGATATTATAATCGGAAAGCGTGCGACCATCTTCTAGTTGT 63586 Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958 ||||| || |||| | ||| |||||||| || | |||||||| || |||||| Sbjct 63585 TTACCGGCGAAAATCAATCTTTGCTGATCTGGTGGAATTCCCTCTTTATCCTGAATTTTA 63526 Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018 || || | | | |||||| || ||| ||| | ||| || ||||| || || Sbjct 63525 GCCTTAACGTTTTCAATTGTATCGGAAGCCTCAACTTCCAAGGTGATAGTTTTTCCAGTC 63466 Query 19019 AAAGTTTTGACAAAAATTTGCATT 19042 || || || ||||||||||||||| Sbjct 63465 AAGGTCTTAACAAAAATTTGCATT 63442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414387874620400