Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq34676 145 9e-30 seq22055 127 2e-24 seq23173 82.4 9e-11 >seq34676 Length=84891 Score = 145 bits (160), Expect = 9e-30 Identities = 168/224 (75%), Gaps = 8/224 (4%) Strand=Plus/Minus Query 7175 TATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTT 7234 |||| |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| Sbjct 20835 TATATTTAGCTCCAAAATGTCTCCATTGAAATCCATAAACAGGACCTAAATCGCCTTCTT 20776 Query 7235 CACGATGATTAAATCC----TAATCGATTTAAATTAGATTTTGATCCATAAGCATCCCAA 7290 |||||| | | ||||| |||||| ||||| | || | || | ||||||| Sbjct 20775 CACGATCAGTGAATCCGCAGGAATCGA--GAAATT--CTCGGGAACTATTTGGATCCCAA 20720 Query 7291 ATATGTACAGAtttttttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAA 7350 ||||| || ||||||| | ||| | | |||||| ||||| || |||||| | | Sbjct 20719 ATATGAACGGATTTTTCCGTTAATTCCTTGGCATTTGTCGATCCACGAATGAACCAGAGA 20660 Query 7351 AGTTCTTCTACTATTCCACGCCAAAACATTCTTTTTGTAGTGAA 7394 ||||| || || | ||| |||||||| | | |||||| || || Sbjct 20659 AGTTCCTCGACGACTCCTCGCCAAAAGACACGTTTTGTCGTTAA 20616 >seq22055 Length=66639 Score = 127 bits (140), Expect = 2e-24 Identities = 215/306 (70%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 |||||||||||||||| |||||| | |||||| | || |||||| || |||||| | Sbjct 35896 ATTGGAATTTTGAAGATATGGGAATTGGTGGATTGGACAAGGAATTTACTGATATTTTTA 35837 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAA-TAATaaaaaaaTTAGGCTGTAAA 164511 ||||||| |||||||| ||| | || | || | | | |||||| | |||| Sbjct 35836 GACGAGCTTTTGCTTCAAGA-CTTTTATCAGCGGACGTTGTGTCGAAATTAAATTTTAAA 35778 Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571 ||| |||||||||| ||| | |||||||||| ||| |||||| || |||||||||||| Sbjct 35777 CATGTAAAAGGAATATTACTTTATGGACCTCCAGGTACCGGTAAGACCTTAATGGCTCGA 35718 Query 164572 TGCATTGCTCAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATGGTCCTGAATTA 164628 |||| ||| | | ||| | || ||| |||||||| ||||| || | | Sbjct 35717 CAAATTG-GCAAAATGCTCAATGCCAAGGAACCG--AAAATTGTCAATGGACCACAGATT 35661 Query 164629 TTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAA 164688 || | |||||||| || || ||||| |||||| ||| | || || ||||| Sbjct 35660 CTGGATAAATATGTCGGCGAAAGTGAAGCAAATGTTCGAAGACTTTTCGCTGATGCTGAG 35601 Query 164689 GAAGAA 164694 |||||| Sbjct 35600 GAAGAA 35595 >seq23173 Length=177085 Score = 82.4 bits (90), Expect = 9e-11 Identities = 207/312 (66%), Gaps = 6/312 (2%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| ||||| || ||||||| | || || ||||| |||| | | ||||| Sbjct 26893 ATTGGGATTTTCAAAAAATGGGTATTGGCGGTTTAGATAAAGAAGTGAGTGCCATTTTTC 26834 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 || |||||||||| || | | |||| ||| | | | || | || ||||||| Sbjct 26833 GAAGAGCATTTGCCTCACGTGTATTTCCGCCTGAAGTTGTCACGCAACTTGGTTGTAAAC 26774 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 | | || ||||||||| | |||| || || || ||||||||||||||||| ||| Sbjct 26773 ACGTGAAGGGAATTTTACTCTATGGTCCACCGGGAACTGGTAAAACATTAATGGCACGAC 26714 Query 164573 GCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTAT 164629 |||| | || | | ||| | || || || ||||| ||||| || || | | Sbjct 26713 AAATTGGT-AATATGCTGAATGCAAGGGAACC--AAAGATTGTCAATGGCCCGCAAATTT 26657 Query 164630 TGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAG 164689 | |||| || || ||||| ||||| || || ||| || || || ||||||| Sbjct 26656 TAGACAAGTACGTGGGTGAAAGTGAAGCAAACATTCGAAGATTATTCGCCGACGCTGAAG 26597 Query 164690 AAGAACAAAAGA 164701 ||||| |||||| Sbjct 26596 AAGAAGAAAAGA 26585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595599388560000